Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1344 ATGGGAAGCTACCGAGTCTGCGTGTGCTTCCGGCGGAGTTTCAAGTCCAGGGAGGCGGTGGTGCCTCAGGAGATCCGGGAGCTTTTCATCAAGTACTCCGAAGGTGGGGCCCATATGACTCCCGACCAGCTCCGCCGCTTCCTCGCGGAGGTTCAGGGCGAGGTAGTGGAGGAGATTGATGAACTTGACCCGCAAAAGGTGGTGGAGGAAGTTTTGCAAAAGCGGCATCACATTACGAAATTTGCGAGGCATAACCTCGCGCTTGATGATTTTCATCATTACCTATTTTCTCCAGAATTCAATCCTCCGATTAGATCTCAGGTTAATCAGGATATGACAGCTCCATTGTCCCATTATTTCATATATACGGGCCATAACTCCTATCTCACTGGAAATCAACTCAGCAGTGTTTGTAGTGATGTTCCCATTATAAAGGCATTGGAAAGAGGCGTGAGAGTTGTTGAGCTTGATATTTGGCCCAATTCCACCAAGGATGATATTCTTGTTTTACATGGAAGGACATTGACACCACCTGTGGAGTTGGTCAAATGTTTGAGATCCATTAAAGATCACGCTTTCGTTGCATCTCCTTATCCAGTCATAATTACTCTGGAAGACCATCTTAAAGCAGACCTTCAAAAAAAAGCTGCTCAGATGATAACTCAAACATTTGGAGATATGTTGTTCTGTCCAAATGATGAAAATTTGAACAATATTCCTTCACCTGAAGAATTGAAGCATAGGATCATGATATCAACAAAACCTCCACGAGAGTACTTAAATTCCAAAAGCGGCGACTCTGACAATCAACTGAATGATGATGATGTATCAAGTGATGATGAGTATGAATCAAATCAAGAGAGCGAATATAAGCGTTTAATTGCTATTCATGCTGGAAAGCCTAAGGGTAGTCTTAAGGAAGCCTTAAAAGTTGAAGAGGATAAAGTGAGACGTCTTAGCTTAAGTGAACAAGCTCTTGAAAAGGCTGCTGAGTCACTTGGAACTGATCTTATTAGGTTCACCCAGAAGAACTTTTTGAGGATATATCCGAAGGGTACACGGGTCACCTCCTCCAACTACAAGCCAATGGTTGGCTGGATGCATGGTGCTCAAATGGTTGCATTCAATATGCAGGGATATGGCAAAAATCTTTGGTTGATGCATGGAATGTTTAGATCCAATGGTGGTTGTGGTTATGTAAAAAAACCAGACTTTCTTATGAATGTAGGTCCAAATAATGAGGTATTCAATCCTAAAGATAAGTTGCAAGTGAAGAAGACTCTTAAGGTGAAAATATATGTGGGAGATGGATGGAGTATAGATTTTGACAAAACTCACTTTGACTTATATTCTCCACCAGACTTTTATGCCAGGGTTGGCATAGCTGGAGTACCAGCTGATGTAACAATGAAGGAAACAAAGATAAAAGAGGATAATTGGGTACCTACATGGGAAGAAGAGTTTACCTTTCCTTTAACTGTCCCTGAACTTGCTTTGCTAAGAGTGGAAGTCCAAGAATATGACATGTCTGAGACAGATGATTTTGCAGGCCAAACTTGTTTACCAATCACAGAACTAAAACAAGGGATCCGCGCTGTTCCACTCTACGACCGAAAAGGAAAGCAGTATAAGTCAGTTAGGCTTCTTATGCGATTCGATTTTATTTAA 1668 0.4185 MGSYRVCVCFRRSFKSREAVVPQEIRELFIKYSEGGAHMTPDQLRRFLAEVQGEVVEEIDELDPQKVVEEVLQKRHHITKFARHNLALDDFHHYLFSPEFNPPIRSQVNQDMTAPLSHYFIYTGHNSYLTGNQLSSVCSDVPIIKALERGVRVVELDIWPNSTKDDILVLHGRTLTPPVELVKCLRSIKDHAFVASPYPVIITLEDHLKADLQKKAAQMITQTFGDMLFCPNDENLNNIPSPEELKHRIMISTKPPREYLNSKSGDSDNQLNDDDVSSDDEYESNQESEYKRLIAIHAGKPKGSLKEALKVEEDKVRRLSLSEQALEKAAESLGTDLIRFTQKNFLRIYPKGTRVTSSNYKPMVGWMHGAQMVAFNMQGYGKNLWLMHGMFRSNGGCGYVKKPDFLMNVGPNNEVFNPKDKLQVKKTLKVKIYVGDGWSIDFDKTHFDLYSPPDFYARVGIAGVPADVTMKETKIKEDNWVPTWEEEFTFPLTVPELALLRVEVQEYDMSETDDFAGQTCLPITELKQGIRAVPLYDRKGKQYKSVRLLMRFDFI* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1344 555 PRINTS Phospholipase C signature 115 133 IPR001192 GO:0035556
Psa2g1344 555 PRINTS Phospholipase C signature 141 161 IPR001192 GO:0035556
Psa2g1344 555 PRINTS Phospholipase C signature 238 255 IPR001192 GO:0035556
Psa2g1344 555 PRINTS Phospholipase C signature 345 366 IPR001192 GO:0035556
Psa2g1344 555 PRINTS Phospholipase C signature 366 384 IPR001192 GO:0035556
Psa2g1344 555 PRINTS Phospholipase C signature 521 531 IPR001192 GO:0035556
Psa2g1344 555 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 555 IPR001192 GO:0035556
Psa2g1344 555 SUPERFAMILY EF-hand 15 112 IPR011992 -
Psa2g1344 555 Gene3D - 20 103 - -
Psa2g1344 555 Pfam Phosphoinositide-specific phospholipase C, efhand-like 23 99 IPR015359 -
Psa2g1344 555 ProSiteProfiles C2 domain profile. 401 537 IPR000008 -
Psa2g1344 555 Pfam C2 domain 450 529 IPR000008 -
Psa2g1344 555 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 555 - -
Psa2g1344 555 CDD PI-PLCc_plant 110 394 - -
Psa2g1344 555 CDD C2_PLC_like 425 554 - -
Psa2g1344 555 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 317 405 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Psa2g1344 555 SMART plcx_3 110 254 IPR000909 -
Psa2g1344 555 SMART C2_3c 427 535 IPR000008 -
Psa2g1344 555 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 110 254 - -
Psa2g1344 555 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 427 554 IPR035892 -
Psa2g1344 555 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 320 406 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Psa2g1344 555 Gene3D C2 domain 421 555 IPR035892 -
Psa2g1344 555 MobiDBLite consensus disorder prediction 258 284 - -
Psa2g1344 555 Gene3D Phosphatidylinositol (PI) phosphodiesterase 107 419 IPR017946 GO:0006629|GO:0008081
Psa2g1344 555 SUPERFAMILY PLC-like phosphodiesterases 113 418 IPR017946 GO:0006629|GO:0008081
Psa2g1344 555 Pfam Phosphatidylinositol-specific phospholipase C, X domain 112 254 IPR000909 -
Psa2g1344 555 SMART plcy_3 290 407 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1344 Psa-Chr2 102463633 102469838 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1344 1 555 Acyl Lipid Metabolism Gene Families AT5G58700 60.269 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1344 K05857 - cit:102623592 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1344 2 102463633 102469838 Psa2g1344 2 102463633 102469838 ECH
Psa2g1344 2 102463633 102469838 Psa5g2996 5 230567064 230571343 ECH
Psa2g1344 2 102463633 102469838 Psa2g0764 2 46968770 46971876 ECH