Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2204 ATGTCTCAAGTTGTGGCCACACGATCCATTCAAACCACCCTCCCCAGTTCTGGATCTACACATGACAGAGCTCAGAAGCTGTTAAAGCCTTCAACTTTTGCTTCCAAAGTGTTCCAACCAAAAGGGAACAGGTGTTCTAAATTGGTCTTCAGAAGCTCTCGTATCAGTGCAAGGAAATCAGCTCCTGTTGAAGTTGTACCTGTGTCACCTGAAGATGATCCAAAGGTTGAGGAGCATTTGCAGCGTTTGCGTGGGGTACAGCCATTTGGTGATACTTCTAATGGAATATGGTCGAAGCCGACGGTTAAGCGTAAGACAAAGATAGTATGTACTATTGGACCTTCTACTGATACTAAGGAAATGATTTGGAAGTTGGCTGAGGCTGGTATGAATGTTGCTCGTCTAAATATGTCTCACGGTGATCATGCTTCTCATCAGAAAGTTATTGACTTGGTTAAAGAATATAATGCACAATCTAAGGACAATGTTATTGCAATTATGCTCGACACCAAGGGTCCAGAGGTTAGGAGTGGGGATTTGCCACAACCAATCAATTTGGCAACCGGGCAGGAATTCACTTTTACTATTCAGAGAGGTGTTGGAACTGCAGACTGTGTCAGTGTAAACTACGATGATTTCGTCAATGATGTAGCAGAGGGGGACATGATTCTTGTTGATGGCGGTATGATGTCGTTGATGGTTAAGTCGAAGACAGAGACTTTAGTGAAATGTGAAGTTGTTGATGGAGGAGAGCTTAAGTCAAGGAGACATTTAAATGTTCGAGGAAAAAGTGCAACATTGCCTTCAATAACTGAGAAGGATTGGGATGATATCAAATTCGGAGTGGATAACAAAGTTGATTTCTACGCTGTTTCTTTTGTTAAGGATGCCGAAGTTGTTCACGAACTGAAGAACTATTTGAAGAGTTGTGATGCTGATATACATGTCATCGTAAAAATTGAAAGTGCGGACTCTATACCGAATTTACATTCAATTATCACAGCATCCGATGGGGCTATGGTTGCCAGAGGAGATCTTGGCGCTGAGCTTCCTATTGAAGAGGTTCCCCTTTTACAGGAAGAGATAATCAACTTGTGCCGAAGCATGGGAAAAGCCGTGATTGTTGCAACGAATATGCTTGAAAGCATGATTGTTCATCCAACTCCAACTAGAGCTGAGGTATCGGATATAGCTATCGCTGTTCGAGAAGGCTCTGATGGCATAATGCTCTCCGGAGAAACTGCACACGGCAAGTTCCCACTAAAAGCTGTGAAAGTGATGCACACGGTAGCATTACGGACAGAAGCCACTATACAAGGCGGCCAAATGCCACCTAACATTGGTCAAGTGTTCAAGAATCACATGAGTGAGATGTTTGCATACCATGCAACCATTATGTCTAACACGCTAGGAACCTCTACCGTCGTCTTCACTCGAACGGGTTTCATGGCTATCCTACTCAGTCACTATCGTCCTTCTGGCACAATATTTGCTTTCACAGACGAAAAGAGGGTACAACAACGGCTGGCTTTGTATCAAGGAGTTTGCCCTGTATACATGGAGTTCAGCGACGATTCCGAAGAAACTTTTATAAGAGCCTTGGATTTTCTACAGAAGCAAGGAATGGTTAAGTTAGGAGAAGAAGTTGCACTTGTACAAAGTGGTAGACAACCCATATGGAGATTCCAATCAACTCACAATATTCAAGTCAGAAAAGTTGAATGA 1725 0.4296 MSQVVATRSIQTTLPSSGSTHDRAQKLLKPSTFASKVFQPKGNRCSKLVFRSSRISARKSAPVEVVPVSPEDDPKVEEHLQRLRGVQPFGDTSNGIWSKPTVKRKTKIVCTIGPSTDTKEMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPINLATGQEFTFTIQRGVGTADCVSVNYDDFVNDVAEGDMILVDGGMMSLMVKSKTETLVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAEVVHELKNYLKSCDADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIQGGQMPPNIGQVFKNHMSEMFAYHATIMSNTLGTSTVVFTRTGFMAILLSHYRPSGTIFAFTDEKRVQQRLALYQGVCPVYMEFSDDSEETFIRALDFLQKQGMVKLGEEVALVQSGRQPIWRFQSTHNIQVRKVE* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2204 574 Gene3D - 446 574 IPR036918 -
Psa1g2204 574 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 96 438 IPR015813 GO:0003824
Psa1g2204 574 TIGRFAM pyruv_kin: pyruvate kinase 104 572 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa1g2204 574 Gene3D - 174 267 IPR015806 GO:0004743|GO:0006096
Psa1g2204 574 Pfam Pyruvate kinase, alpha/beta domain 466 553 IPR015795 -
Psa1g2204 574 ProSitePatterns Pyruvate kinase active site signature. 314 326 IPR018209 GO:0004743|GO:0006096
Psa1g2204 574 PANTHER PLASTIDIAL PYRUVATE KINASE 2 43 573 - -
Psa1g2204 574 PRINTS Pyruvate kinase family signature 162 178 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa1g2204 574 PRINTS Pyruvate kinase family signature 286 300 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa1g2204 574 PRINTS Pyruvate kinase family signature 316 342 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa1g2204 574 PRINTS Pyruvate kinase family signature 343 367 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa1g2204 574 PRINTS Pyruvate kinase family signature 368 392 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa1g2204 574 PRINTS Pyruvate kinase family signature 393 411 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa1g2204 574 PRINTS Pyruvate kinase family signature 412 428 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa1g2204 574 MobiDBLite consensus disorder prediction 1 24 - -
Psa1g2204 574 Pfam Pyruvate kinase, barrel domain 104 439 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa1g2204 574 PANTHER PYRUVATE KINASE 43 573 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa1g2204 574 SUPERFAMILY PK beta-barrel domain-like 173 264 IPR011037 -
Psa1g2204 574 Gene3D - 106 431 IPR040442 -
Psa1g2204 574 SUPERFAMILY PK C-terminal domain-like 422 573 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2204 Psa-Chr1 167383592 167388524 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2204 K00873 - gmx:100809327 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g2204 1 167383592 167388524 Psa6g4443 6 390696078 390702984 PCT