Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1739 ATGGATCCCAACCCCGGAACCTTCCCTATCCTCTCCTACGTCATGAGTCGTCTCCCTTCTCTGGGTTCCAGACCTTCCGCCGCCGCCGAATTCGATATCGAACAACCTCACCCTGTGCCGCCGCCGCCGCCGCCACATCTTCGCCCATCTTCGCCTGAATCCGATATTGTGGGCAAAATGCCTCACCTCACTGATCCCAAACTCTTAGCTGCCATGACCCGCGCAGTCTCCGACGTCTCCCAGACCCGATCAATACTCAAGCTTATCGGGGAGCGACCCGACCATGAAGCCGTCGATCGTGCAAAGGCCAAGCTTGCGGATATTGAAGCCCTTTTGTCCAAGCAACTTGAGGAGATTGTGCTGTCCCGGAGGCCCGAGAATATTGACATCCTTCAGTGGCGAGCTAATCAAGCCGAAAAAGAGAAGGAGTGCAGGGAGTTAGCGGAGAAAGATATGCGGCCGTGTAAATCACTGATACAGTTGGACGAGATGCACGATGCTTATGAGAAACTGCTTAAGGATGCTGAGAAGAGGCTGGTAGAAATTTACGAGTCTGGTGGGGAAGCACCGGATAGTGCCGAGGGTGAGAAAGACGAGCACGTTGGGGAAGAGGTCAACGAAGAGGTTGTGGGGATAATGTGGGAGGCATATGGAAAGGGGATAGAGCGATTGGATCTTTCAGGGCGGCGGTTAAGGTTCTTGCCTGAGGCCTTTGGACGAATCCCTGGATTGGTTGCGCTTGATCTTTCGAACAATCAGCTCGAGGCGATCCCTGATTCAGTAGCTGGGTTGCAAAGTCTTGAAGAGCTTAATGTCTCTTCAAATCTTTTGGAGTCTCTTCCAGATTCAATCGGCTTGTTACAAAAATTGAAATTTCTGAATGTCTCTGGGAACAAGCTAAATGCCCTACCTGATTCCATCTGTCACTGCAGGTCATTGGTGGAGCTGGATGTAAGCTTCAATGGTCTGACATATTTGCCAACAAACATTGGACATGAACTAGTAAACTTACAGAGGCTGTCTATTCAATTGAACAAGATTCGATCTCTTCCATCATCTGTTTGTGAAATGAGAGCGTTGCGCTGTCTAGATGCTCATTTTAATGAGCTTCATGGGCTTCCTATTGCAATAGGGAAATTGACTAATCTTGAAGTTCTCAACCTGAGCAGTAATTTCAGTGACCTTAGAGAACTTCCTGAGACATTTGGTGATCTGACTAACCTCAGGGAATTGGATCTCAGCAACAATCAGATTCATGCACTTCCTGATACATTTGGTCGCCTTGACAATTTGGTCAAGCTCAACTTGGGGGAGAACCCTCTGGAATTGCCACCAAAGGAAATTGTAGATGAAGGGGTTGGAGCCGTAAAAACTTTTATGGCTAAGAGATGGGTTGATATATTGCTTGAGGAGGAAAGGAAAAGCCGTGAAATCCAAGAACTGGCAGAGGCTGGCTGGTTAACACGAAGCACCTCCTGGTTGAAGAATTATGTATCCAGTGTTTCTGGAAATGTTACCGAGTATCTGGGATCTGCCTTGGGATCTCCTAGGACTCCAAGAGATCCTTACCTTGATCAGCGGCTTTAA 1587 0.4827 MDPNPGTFPILSYVMSRLPSLGSRPSAAAEFDIEQPHPVPPPPPPHLRPSSPESDIVGKMPHLTDPKLLAAMTRAVSDVSQTRSILKLIGERPDHEAVDRAKAKLADIEALLSKQLEEIVLSRRPENIDILQWRANQAEKEKECRELAEKDMRPCKSLIQLDEMHDAYEKLLKDAEKRLVEIYESGGEAPDSAEGEKDEHVGEEVNEEVVGIMWEAYGKGIERLDLSGRRLRFLPEAFGRIPGLVALDLSNNQLEAIPDSVAGLQSLEELNVSSNLLESLPDSIGLLQKLKFLNVSGNKLNALPDSICHCRSLVELDVSFNGLTYLPTNIGHELVNLQRLSIQLNKIRSLPSSVCEMRALRCLDAHFNELHGLPIAIGKLTNLEVLNLSSNFSDLRELPETFGDLTNLRELDLSNNQIHALPDTFGRLDNLVKLNLGENPLELPPKEIVDEGVGAVKTFMAKRWVDILLEEERKSREIQELAEAGWLTRSTSWLKNYVSSVSGNVTEYLGSALGSPRTPRDPYLDQRL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1739 528 MobiDBLite consensus disorder prediction 35 50 - -
Prci9g1739 528 FunFam Plant intracellular Ras-group-related LRR protein 2 329 501 - -
Prci9g1739 528 Gene3D Ribonuclease Inhibitor 360 460 IPR032675 -
Prci9g1739 528 Pfam Leucine rich repeat 311 370 IPR001611 GO:0005515
Prci9g1739 528 Pfam Leucine rich repeat 242 300 IPR001611 GO:0005515
Prci9g1739 528 Pfam Leucine rich repeat 382 441 IPR001611 GO:0005515
Prci9g1739 528 Gene3D Ribonuclease Inhibitor 108 357 IPR032675 -
Prci9g1739 528 ProSiteProfiles Leucine-rich repeat profile. 407 428 IPR001611 GO:0005515
Prci9g1739 528 Coils Coil 158 185 - -
Prci9g1739 528 SMART LRR_bac_2 310 329 - -
Prci9g1739 528 SMART LRR_bac_2 405 424 - -
Prci9g1739 528 SMART LRR_bac_2 264 283 - -
Prci9g1739 528 SMART LRR_bac_2 287 306 - -
Prci9g1739 528 SMART LRR_bac_2 334 353 - -
Prci9g1739 528 SMART LRR_bac_2 241 260 - -
Prci9g1739 528 SMART LRR_bac_2 380 401 - -
Prci9g1739 528 SMART LRR_typ_2 405 427 IPR003591 -
Prci9g1739 528 SMART LRR_typ_2 264 286 IPR003591 -
Prci9g1739 528 SMART LRR_typ_2 241 263 IPR003591 -
Prci9g1739 528 SMART LRR_typ_2 311 333 IPR003591 -
Prci9g1739 528 SMART LRR_typ_2 334 357 IPR003591 -
Prci9g1739 528 SMART LRR_typ_2 428 451 IPR003591 -
Prci9g1739 528 SMART LRR_typ_2 380 404 IPR003591 -
Prci9g1739 528 SMART LRR_typ_2 287 310 IPR003591 -
Prci9g1739 528 FunFam Plant intracellular Ras-group-related LRR protein 9 140 325 - -
Prci9g1739 528 ProSiteProfiles Leucine-rich repeat profile. 266 287 IPR001611 GO:0005515
Prci9g1739 528 MobiDBLite consensus disorder prediction 20 56 - -
Prci9g1739 528 Coils Coil 98 118 - -
Prci9g1739 528 MobiDBLite consensus disorder prediction 509 528 - -
Prci9g1739 528 Coils Coil 130 150 - -
Prci9g1739 528 PRINTS Leucine-rich repeat signature 244 257 - -
Prci9g1739 528 PRINTS Leucine-rich repeat signature 405 418 - -
Prci9g1739 528 PANTHER LEUCINE-RICH REPEAT-CONTAINING 270 448 - -
Prci9g1739 528 SUPERFAMILY L domain-like 220 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1739 Prci-Chr9 29436892 29439928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1739 223 447 Receptor kinase-like Gene Family AT5G07180 31.915 1.43e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1739 - - gmx:100803823 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2793 4 40025787 40028425 Prci9g1739 9 29436892 29439928 CCT
Prci9g1739 9 29436892 29439928 Prci9g1739 9 29436892 29439928 ECH