Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2793 ATGGATCCCAACCCTGGAAGCTTCCCTCTCCTCTCCTCCTTCATGTCCCGTCTCCCTCCTCTCGCTCCCACCACCTCTTCCAATTCTGAGCTCTACGACATCGAACAGCCCCGCTTCCCTCCACCCTCCGATCCTTCTTCCTCATCCTCTTCCAGTATCAAAAATCCTGAACTTGTTGCTCAGATGCCCCGAATCACTGACCCAAAACTGTTGGCTTCCATTGCCCGCACCATCTACGACGTCGCTCAGACCCGATCCATGATCAGAGTCCTTGGCGACCGACCTGACCACGAATCAGTCGACAATGCCAAGGCTAAACTCGCCGATTTGGATGCCCATTTGTCCAGGCAGCTAGAGGAGATCGTGCTATCTCCTAAGCCTCCTCATCTCGACACCCATCAATGGCGGAGTCAGCAGGCCGAGAAAGAGAAGGAGTGCAGGAAATTAGCGGAGGATGAGAAGCGAGTGTACAAAGCAGTGATACAATTGGACGAAATGCACGATGCGTATGAGAAATTGCTCAAGGATGCAGAGAAAAGATTGGAGTCGATTTACAATTCCGCCGACGGGGTACCAGATCCCGAGGAAGACAAGGCGGAGACGGAGGAGGTCAACGAAGAGGTTGTCGGGATTCTGCAAAAGACCTATGGACAAGGGATAGAGCGAATTGATCTTTCGAATCGCGGCCTGAGGCTTCTTCCCGAGGCCTTTTGGCGGATTTCTGGGTTGGTGGTGCTTGATGTTTCAAACAATCAGCTGACGGCGATTCCTGACGCGGTAGCTGGATTGCAAAATCTTGAGGAGCTTAACGTATCTACAAATCATTTGGAAACACTTCCTGATTCAATTGGCTTGCTGCAAAAGTTGAAAATCCTGAATGTCTCGGGAAACAAACTGAGCGCCTTTCCTGACTCCATCTCTCAGTGCAGGTCATTGGTGGAGTTGGATGCTAGCTTCAACAGTCTCAGGTATTTGCCTACAAATATTGGATATGAATTACAGAACTTGCGGAAGCTGTTGATTCATTTGAACAAACTTCGGTCGCTTCCCTCATCTGTTTGTGAGATGAGATCCTTGCGCTATCTAGATGCGCATTTCAATGAGCTGAATGGACTTCCGAGTGCATTTGGAAGATTGACTAATCTTGAGGTTCTGGACCTGAGCAGTAATTTCGCCGACCTTCAAGAACTCCCTGCGACATTTTCTGACCTGATCAACCTCAAGGAGTTGGATCTTAGCAACAATCAGATCAGTGCACTTCCTGATACATTTGGTCGCCTGGAGAATTTGACGAAGCTCAACTTGGAGCAGAACCCTCTGGAAGTGCCGCCAAAAGAGGTGGTAAGGCTAGGAGCTCAAACCGTGAGAAATTATATGACAACGAGGTTGGTGAACATATTAAACGAGGAAGAAAGGGACAGGATTGCGATGCAAGAACAATCCCAGATGGGGTGGTTAACGCGAAGCACCTCCTGGTTGAAGAGCGTCTCCGAGAACGTTGCAGAATATGTCATGTCTCCTAAAACTCCCAAACAGGCTTATCTTAATGAGCAGCTATAA 1560 0.4891 MDPNPGSFPLLSSFMSRLPPLAPTTSSNSELYDIEQPRFPPPSDPSSSSSSSIKNPELVAQMPRITDPKLLASIARTIYDVAQTRSMIRVLGDRPDHESVDNAKAKLADLDAHLSRQLEEIVLSPKPPHLDTHQWRSQQAEKEKECRKLAEDEKRVYKAVIQLDEMHDAYEKLLKDAEKRLESIYNSADGVPDPEEDKAETEEVNEEVVGILQKTYGQGIERIDLSNRGLRLLPEAFWRISGLVVLDVSNNQLTAIPDAVAGLQNLEELNVSTNHLETLPDSIGLLQKLKILNVSGNKLSAFPDSISQCRSLVELDASFNSLRYLPTNIGYELQNLRKLLIHLNKLRSLPSSVCEMRSLRYLDAHFNELNGLPSAFGRLTNLEVLDLSSNFADLQELPATFSDLINLKELDLSNNQISALPDTFGRLENLTKLNLEQNPLEVPPKEVVRLGAQTVRNYMTTRLVNILNEEERDRIAMQEQSQMGWLTRSTSWLKSVSENVAEYVMSPKTPKQAYLNEQL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2793 519 Gene3D Ribonuclease Inhibitor 335 459 IPR032675 -
Prci4g2793 519 MobiDBLite consensus disorder prediction 1 54 - -
Prci4g2793 519 PANTHER - 220 330 - -
Prci4g2793 519 SUPERFAMILY L domain-like 218 444 - -
Prci4g2793 519 Coils Coil 100 120 - -
Prci4g2793 519 PRINTS Leucine-rich repeat signature 243 256 - -
Prci4g2793 519 PRINTS Leucine-rich repeat signature 404 417 - -
Prci4g2793 519 ProSiteProfiles Leucine-rich repeat profile. 265 286 IPR001611 GO:0005515
Prci4g2793 519 FunFam Plant intracellular Ras-group-related LRR protein 9 142 324 - -
Prci4g2793 519 SMART LRR_typ_2 263 285 IPR003591 -
Prci4g2793 519 SMART LRR_typ_2 286 309 IPR003591 -
Prci4g2793 519 SMART LRR_typ_2 427 450 IPR003591 -
Prci4g2793 519 SMART LRR_typ_2 356 378 IPR003591 -
Prci4g2793 519 SMART LRR_typ_2 240 262 IPR003591 -
Prci4g2793 519 SMART LRR_typ_2 379 403 IPR003591 -
Prci4g2793 519 SMART LRR_typ_2 404 426 IPR003591 -
Prci4g2793 519 SMART LRR_typ_2 333 354 IPR003591 -
Prci4g2793 519 SMART LRR_typ_2 310 332 IPR003591 -
Prci4g2793 519 Gene3D Ribonuclease Inhibitor 113 334 IPR032675 -
Prci4g2793 519 Coils Coil 160 187 - -
Prci4g2793 519 Pfam Leucine rich repeat 335 390 IPR001611 GO:0005515
Prci4g2793 519 Pfam Leucine rich repeat 265 322 IPR001611 GO:0005515
Prci4g2793 519 Pfam Leucine rich repeat 398 440 IPR001611 GO:0005515
Prci4g2793 519 SMART LRR_bac_2 263 282 - -
Prci4g2793 519 SMART LRR_bac_2 286 305 - -
Prci4g2793 519 SMART LRR_bac_2 309 328 - -
Prci4g2793 519 SMART LRR_bac_2 333 352 - -
Prci4g2793 519 SMART LRR_bac_2 240 259 - -
Prci4g2793 519 SMART LRR_bac_2 356 375 - -
Prci4g2793 519 SMART LRR_bac_2 404 423 - -
Prci4g2793 519 SMART LRR_bac_2 379 400 - -
Prci4g2793 519 FunFam Plant intracellular Ras-group-related LRR protein 2 328 500 - -
Prci4g2793 519 ProSiteProfiles Leucine-rich repeat profile. 406 427 IPR001611 GO:0005515
Prci4g2793 519 MobiDBLite consensus disorder prediction 18 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2793 Prci-Chr4 40025787 40028425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2793 233 450 Receptor kinase-like Gene Family AT5G46330 32.301 4.27e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2793 - - gmx:100803823 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2793 4 40025787 40028425 Prci9g1739 9 29436892 29439928 CCT
Prci4g2793 4 40025787 40028425 Prci4g2793 4 40025787 40028425 ECH