Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1413 ATGTCGAAGCTGCTTCCCTACAGCTCCGTTCACAGATGCACCACCTTCCTTGCCCCTCCCTTCCCCGCCTCTGTTGCCTCCGTTTCGCGCCTCCATTTTCGAAGCCGCCTCTGCGTTTCGGTTTCTTTTCAATCGCACCTTAAAAATCTTTGTCCCTTTCAGTCCCGTAGAGACCTATCAGTTTGCGCTTTCGATTCTTCATCTTCAGAGACTAAAGACGAGGAAGAAGCTGTCGGGAAGGATGAAATCAATAATCAGTTTGTTAGAACTGCTGGTGAGGATTATCCGACCGGGGAATTTGAATTTCAACCCATTACGGGTTGGAGAGGATTTCTAGTGAAGCTTAAGATGCTGGTTGCTTTCCCTTGGGAGCGTGTTCGCAAGGGCAGCGTTCTCACAATGAAGTTGCGCGGCCAGATATCTGATCAAATAAAGAGTAGATTCTCTCGGGGATTATCTCTGCCTCAGATTTGCGAGAACTTCTTGAAAGCAGCATATGATCCTCGTATTACTGGTGTTTATCTACATATTGATATTTTGAATTGTGGGTGGGGTAAAGTAGAAGAAATTCGAAGGCACATACTGAACTTCAAACAATCAGGAAAATTTATTGTGGCTTATGTCCCTTCATGTCAAGAAAAAGAATACTACCTTGCTTGTGCTTGTGACGAGATATACGCCCCTCCAAGTGCCTATTTTTCTTTGTTTGGCTTGACTGTTCAAGCCTCATTTCTCAGGGGTGTTTTAGATAACATAGGAATTGAACCACAAGTGGAAAGGATTGGCAAATACAAAAGCGCTGGGGATCAACTGGCCTGCAAAACCATATCTGAGGCAAACAGTGAGATGCTGACTGCATTGCTTGACAATATCTACACAAACTGGCTGGATAAAGTTTCCTCTGCAAAAGGAAAAAAGAGAGAAGATATTGAGAACTTTATAAATGAAGGAGTTTATCAAGTAGACAAGCTGAAAGAAGAGGGCTTCATAACTAATATAATCTATGATGACGAGGTTGTTTCAATGATGAAAGACAGACTTGGAGTAGAAACAGATAAAAATCTTGCCATGGTGGATTACAGAAAGTATTCCAGAGTTAGGAAATGGACCATTGGAATGTCAGGTGGTAAAGACTTGATAGCTCTTATCCGAGCCTCAGGGAGTATTAGCCGTATTGAGGGTCCATTGGGTGTGTCAGGCTCAGGGATCATTGGAGAGAAGTTTATTGAGAAGATTCGCAGTGTGAGAGAGTCCAAAAAATACAAGGCTGCTATTATCCGAATTGACAGCCCAGGAGGTGATGCTCTTGCGTCTGATCTGATGTGGAGAGAAATCAGACTTTTGGCTGCTTCAAAACCAGTCATTGCTTCAATGTCTGATGTGGCAGCAAGTGGAGGTTATTATATGGCAATGGCAACAGGAACTATTGTTGCAGAAAGCCTTACTTTAACTGGTTCAATTGGAGTGGTTACAGGAAAATTTAACCTGGGCAAACTGTACGAGAAGATTGGATTTAATAAGGAAATCATATCAAGGGGAAGATATGCTGAGCTCTTTGCAGCAGAACAACGCCCTTTTAGACCAGAAGAAGCTGAGTTATTTGCCAAGTCTGCACAGCATGCTTACAAGCAATTTCGAGATAAGGCAGCGCTTTCCAGATCCATGACTGTAGATAAGATGGAGGAGGTTGCACAGGGGAGAGTTTGGACTGGTAGAGATGCAGCTGCAAGGGGTTTGGTTGATGCCATTGGTGGGCTTTCTCGTGCAGTAGCCATAGCAAAATCGAAGGCCAATATACCTGAAGACAAGCAGGTTACAATTGTGGAGCTCTCAAGAACCAGCCCTTCTCTACCAGAGATTTTAAGTGGCATTGGGAGTACCCTGGCTGGAGTAGACAGAACATTGAAGGAACTGGTGCAGAGCTTGACATTTCCTGATGGGGTTCAAGCCCGGATGGATGGCATCATGTTTGAGAGATTGGAAGGATATCCTTACGCCAATCCCATATTGACATTGATAAAGGATTACCTTAGTTCCCTGTAA 2043 0.4381 MSKLLPYSSVHRCTTFLAPPFPASVASVSRLHFRSRLCVSVSFQSHLKNLCPFQSRRDLSVCAFDSSSSETKDEEEAVGKDEINNQFVRTAGEDYPTGEFEFQPITGWRGFLVKLKMLVAFPWERVRKGSVLTMKLRGQISDQIKSRFSRGLSLPQICENFLKAAYDPRITGVYLHIDILNCGWGKVEEIRRHILNFKQSGKFIVAYVPSCQEKEYYLACACDEIYAPPSAYFSLFGLTVQASFLRGVLDNIGIEPQVERIGKYKSAGDQLACKTISEANSEMLTALLDNIYTNWLDKVSSAKGKKREDIENFINEGVYQVDKLKEEGFITNIIYDDEVVSMMKDRLGVETDKNLAMVDYRKYSRVRKWTIGMSGGKDLIALIRASGSISRIEGPLGVSGSGIIGEKFIEKIRSVRESKKYKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMATGTIVAESLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGRYAELFAAEQRPFRPEEAELFAKSAQHAYKQFRDKAALSRSMTVDKMEEVAQGRVWTGRDAAARGLVDAIGGLSRAVAIAKSKANIPEDKQVTIVELSRTSPSLPEILSGIGSTLAGVDRTLKELVQSLTFPDGVQARMDGIMFERLEGYPYANPILTLIKDYLSSL 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1413 680 PIRSF Protease_4_SppA 63 680 IPR004634 GO:0006465|GO:0008233|GO:0016020
Prci9g1413 680 CDD S49_SppA_67K_type 132 345 IPR047217 -
Prci9g1413 680 Gene3D - 375 521 - -
Prci9g1413 680 Pfam Peptidase family S49 197 349 IPR002142 GO:0006508|GO:0008233
Prci9g1413 680 Pfam Peptidase family S49 448 599 IPR002142 GO:0006508|GO:0008233
Prci9g1413 680 SUPERFAMILY ClpP/crotonase 121 338 IPR029045 -
Prci9g1413 680 PANTHER PROTEASE 4 88 679 - -
Prci9g1413 680 SUPERFAMILY ClpP/crotonase 404 585 IPR029045 -
Prci9g1413 680 Gene3D - 129 365 - -
Prci9g1413 680 Gene3D - 522 648 - -
Prci9g1413 680 CDD S49_Sppa_N_C 380 594 IPR047272 -
Prci9g1413 680 NCBIfam signal peptide peptidase SppA 403 594 IPR004635 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1413 Prci-Chr9 27425938 27432783 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1413 K04773 - qsa:O6P43_022959 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g3193 4 43056430 43071297 Prci9g1413 9 27425938 27432783 CCT