Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3193 ATGTGGAGGCTGCTTTTATTCAGCTCTCGTCGCAGCTCCCTTCGGCGTTCCGTAGCAATAGTCGCAACTCTGTCCTCTTCTTCCTCCTTTTCTGCTCCTCTTTCTCATTTCCCATTTCAATGCCGACTCCACCTTTCTCTTCCTTCTCATTCCCAATCTTTCCCACCCTTTCTGTCACTTGCCTTCCATTTTTCCTCCTCTTCTTTCGACTCAAAACCGAAACAAGAGTTGGTTGACAAGGATTCCAGGCCAGACGGTGGCATAAATAATCCTAGTGCGAGAATTGCCGACGAGGATTATCCGAGTGGCGACTTTGATTTTGCGCCCATTTTTGGGTGGAGGAAATTTCTTCTGCAGCTCAAGATGCTCATTGCATTCCCTTTGGAAGGTGTTCGCAAGGGAAGCGTTCTCACAATGAAGTTGCGGGGCCGGATATCTGATCAGCTAAAGAGTCCTTTCTCTCAAGGACTATCTCTGCCTCAAATTTGTGAGAACTTTTCAAAAGCAGCATATGATCCTCGTATTTCTGGTATCTATCTTCATATTGATAAGTTGAATTGTGGATGGGGTAAAGTTGAAGAAATTCAAAGGCAAATATTGAACTTCAAACGATCTGGAAAATTTGTTGTGGCTTATGTCCCTTCATGCCAAGAAAAAGAATACTATCTTGCATGTGCATGTGAAGAAATATATGCCCCTCCAAGTGCTTATTTTTCATTGTTTGGTTTCACTGTTCAAGCGTCATTTCTTAGAGCAAAGACTTTGCACATGGCATGCACTGTCCCTTCCTGCAAGAGATTTACCCGTGTTTTAGATAACATAGGGATTGAACCTCAAGTTGAACGGATTGGGAAATACAAAAGTGCAGGGGATCAGCTAACCCGTAGAACCATGTCTGAAGAAACTTGTGAGATGCTGACTGCACTGCTTGACAATATCTATACAAATTGGCTGGATAAAGTCTCTTCTTCAAGAGGTATAAAAAGAGAAGAAATTGAGAATTTCATAAATGAAGGAGTCTATCAAGTAGACAGGTTGAAAGAAGAAGGCTTCATTACGAACATAATGTATGAGGATGAGGTTATTGCTGGCTTGAGGGGGAAACTCAGGTTAAAAACAAATGAAAGTCTGCGTTTGGTGGATTACAGGTCTCCAATTTCTTTTGTTTTGCCTCTGGTAATGGTATTGAATAAATTATGCTATTTCTCTGGGAAAGTCACCTCTGGGAATGTCCAAAGAAAGTCTGAACACATCCTTTGCCTTGTGAGGAAATACTGTAGAGTTAGGAGATGGACTGTTGGAATATCAGGTGGTAAAGACCTGATAGCCATCATCCGAGCCTCTGGGAGCATTAGTCGTGTCAAGAGTTCATTGAGTTTGTCTAGATCAGTGTCAAAACAATATAAAGCTGCTATTATCCGAATTGACAGTCCTGGTGGTGATGCCCTTGCTTCTGATTTGATGTGGAGAGAAATCAGGCTTTTGGCTGCCTCGAAACCAGTCATTGCCTCATTGTCTGATGTTGCAGCAAGTGGAGGTTACTACATGGCAATGGGAGCTGGGGCTATTGTAGCAGAAAATCTTACCTTAACTGGATCAATTGGAGTGTTCACAGGAAGATTTAACTTGGGGAAACTGTATGAGAAGATTGGCTTCAACAAGGAAATCATATCAAGGGGAAAATATGCTGAGGTCCTTGCTGCTGAACAACGTCCTTTTAGACCAGACGAAGCCGAGCTATTTGCCAAGTCTGCACAGCATATTTATAAACAATTTCGAGATAAGGCGGCTTTTTCTAGATCAATGACTGTAGAAAGGATGGAGGAGGTTGCGCAGGGGAGAGTTTGGAGTGGTAAAGCCGCAGCCTCACACGGTTTGGTTGATGCTATTGGTGGGCTTTCTCGAGCTATTGCCATAGCGAAATTGAAGGCTAATATACCTCAAGACAGACAGGTTACTCTTGTGGAACTTTCACGACCTTCTCTCGCAGAGATTTTAAGTGGCGCAGGGAATACCCTGGCTGAAGTAGATAATACATTGAAGGAACTGCTTCAGGACTTGACATTTTCTGATGGAGTTCAAGCCCGGATGGATGCAATCATGCTTGAGAGATTGGAAGGATATCCTTGCCCAAGTCCCATTTTGAGGCTGATGAAGGATTTCCTTAGTTCCCTGTAG 2178 0.4311 MWRLLLFSSRRSSLRRSVAIVATLSSSSSFSAPLSHFPFQCRLHLSLPSHSQSFPPFLSLAFHFSSSSFDSKPKQELVDKDSRPDGGINNPSARIADEDYPSGDFDFAPIFGWRKFLLQLKMLIAFPLEGVRKGSVLTMKLRGRISDQLKSPFSQGLSLPQICENFSKAAYDPRISGIYLHIDKLNCGWGKVEEIQRQILNFKRSGKFVVAYVPSCQEKEYYLACACEEIYAPPSAYFSLFGFTVQASFLRAKTLHMACTVPSCKRFTRVLDNIGIEPQVERIGKYKSAGDQLTRRTMSEETCEMLTALLDNIYTNWLDKVSSSRGIKREEIENFINEGVYQVDRLKEEGFITNIMYEDEVIAGLRGKLRLKTNESLRLVDYRSPISFVLPLVMVLNKLCYFSGKVTSGNVQRKSEHILCLVRKYCRVRRWTVGISGGKDLIAIIRASGSISRVKSSLSLSRSVSKQYKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASLSDVAASGGYYMAMGAGAIVAENLTLTGSIGVFTGRFNLGKLYEKIGFNKEIISRGKYAEVLAAEQRPFRPDEAELFAKSAQHIYKQFRDKAAFSRSMTVERMEEVAQGRVWSGKAAASHGLVDAIGGLSRAIAIAKLKANIPQDRQVTLVELSRPSLAEILSGAGNTLAEVDNTLKELLQDLTFSDGVQARMDAIMLERLEGYPCPSPILRLMKDFLSSL 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3193 725 Gene3D - 437 566 - -
Prci4g3193 725 NCBIfam signal peptide peptidase SppA 442 640 IPR004635 GO:0006508|GO:0008233
Prci4g3193 725 SUPERFAMILY ClpP/crotonase 126 358 IPR029045 -
Prci4g3193 725 CDD S49_Sppa_N_C 442 641 IPR047272 -
Prci4g3193 725 CDD S49_SppA_67K_type 137 367 IPR047217 -
Prci4g3193 725 PANTHER PROTEASE 4 95 724 - -
Prci4g3193 725 SUPERFAMILY ClpP/crotonase 442 632 IPR029045 -
Prci4g3193 725 Gene3D - 266 326 - -
Prci4g3193 725 MobiDBLite consensus disorder prediction 69 93 - -
Prci4g3193 725 Gene3D - 134 263 - -
Prci4g3193 725 Pfam Peptidase family S49 495 645 IPR002142 GO:0006508|GO:0008233
Prci4g3193 725 Pfam Peptidase family S49 202 366 IPR002142 GO:0006508|GO:0008233
Prci4g3193 725 Gene3D - 567 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3193 Prci-Chr4 43056430 43071297 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3193 K04773 - qsa:O6P43_022959 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g3193 4 43056430 43071297 Prci9g1413 9 27425938 27432783 CCT
Prci4g3193 4 43056430 43071297 Prci4g3193 4 43056430 43071297 ECH