Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0937 ATGTCTGTTTCCATGAGAGATTTGGATCCAGCTTTCCAGGGAGCTGGACAAAAGGCTGGACTTGAGATATGGCGCATTGAGAATTTAAAACCAGTTGCTGTTCCTGCCTCCTCCTTTGGGAAGTTTTTCACTGGGGATTCCTATGTGATATTGAAGACAACTGCTTCAAAAAGTGGTGCACTGCGTCATGATATCCACTACTGGCTTGGTAAAGACACCAGTCAGGATGAAGCTGGTGTTGCAGCCATCAAAACGATTGAGCTAGATGCAGCTCTTGGAGGACGTGCTGTTCAGTATCGTGAATTACAGGGTCGTGAAACTGAAAAGTTCTTGTCTTATTTCAAACCATGTATAATTCCTCAAGAAGGTGGAGTTGCCTCTGGTTTTAAACACGTTGAGGCTGAAGAACATACAACACGCTTGTATGCATGCCAAGGGAAACATGTTGTGCGGGTGAAAGAGGTTCCTTTTGGTCGATCGACACTCACCCATGATGATGTTTTTATTCTGGATACCCAGTCTAAAATCTTTCAATTTAATGGTTCTAATTCATCTATTCAAGAAAGGGCTAAAGCATTGGAAGTTCTACAGTATATAAAGGATAACTACCATGATGGGAAATGTGAGGTTGCCACTGTTGAGGATGGAAAGTTGATGGCTGATGCTGATGCTGGAGAATTCTGGGGCTTCTTTGGGGGCTTTGCTCCTCTTCCACGGAAAACAGCCAGTGACGATGATAGTATTGTTGATTCTCAGTCTCCAAAGCTGCTCTGTGTTGTGAAGGGGCAGGCAGAACCTATTGAGAGTGATTCTTTAATAAGAGAACTACTAGACACAAATAAATGTTATATTCTTGATTGCGGTTTGGAAGTTTTTGTTTGGATGGGAAGAAACACCTCTCTTGATGAAAGAAAAAGTGCAAGTGCAGCTGCAGAAGCATTAATCAGTGGTCCTGATCGACTAAAATCCCACATAATTCGTGTTATTGAAGGATTTGAAACTGTTATGTTCAGATCCAAATTTGACACTTGGCCTCAAACACCTAACGTAACTGTGTCAGAAGATGGTCGTGGCAGGGTGGCAGCACTTCTAAAGCGTCAAGGAGTGGATGTCAAGGGTCTGTTGAAAGTTGATCCAGTAAAAGAAGAACCTCAACCTCACATTGATTGCACAGGACGTTTGCAGGTTTGGCGGGTAAATGGCCAAGAAAAGATTCTCCTTCAAGATTCTGATCAATCAAAACTTTTTAGTGGTGATTGCTATGTCTTTCTCTATTCATATCCTGGAGAAGATAGAGAAGAGCATCTTGTAATAACATGGATTGGAAAGAACAGTGTTGAGGAAGAAAGAGCTTCAGCTATTTTATTGGCAAGCAAGATTTTTGAGTCAATGAAGTTTATTCCTGCCCAGGCTCGTATTTATGAAGGGAATGAACCAATTCAGTTTTATTCTATCCTCCAAAGCTTGATTGTTTTTAAGGGTGGTCTTAGTGATGGATATAAGAATTACATTGCGGAGAAGGAAATTCCAGATGACACGTATAAGGAAGACGGTGTCGCACTATTCCGCATCCAGGGCTCTGGACCTGACAGTATGCAAGCTATACAAGTCGATACGGTTGCTTCTTCCTTGAATTCCTCATATTGCTACATACTTCATGATGGGCTCACAGTCTTCACATGGATTGGAAGCCTTACAAGTACAGATGATCATGAACTAGTTGAGAGGATGCTGGATTTGATAAAGCCAGAATTACAAACGAAACCACAGAAGGAAGGTTCAGAATCTGAACAGTTTTGGGACTTGTTAGGAGGGAAATCAGAGTATCCCAGTCAAAAGATTGCAAGGGCTGCTGAAAGTGATCCTCGCCTATTTTCTTGCAACTTCTCGAAGGAAAATTTGAAGGTAACTGAAATATACAACTTCTCCCAGGATGATTTAACGACTGAAGATATTATGATCTTGTATTGTCACTCAGAAATCTTTGTCTGGGTTGGCCAGCTTGACCCTAAGAGTAGATTGAAAGCTCTAACAATTGGTGAGAAATTTCTTGAGCATGATTTTTGTATGGAAAATTTATCTCGTGAAGCTCCAATATATGTTGTCATGGAAGGGAGTGAACCACTTTTTTTCACTCGCTTCTTCAAATGGGAGTCTGCAAAATCTGCGATGCTGGGAAACTCATTTCAAAGGAGGCTTACAATAATGAAAAATGGGGGCACTCCACCTTTGGATAGACCAAAACGGAGAACATCAGTGTCTTATGGAGGAAGGTCCAACAGTGCACCAGAAAAAGCCCAGCGTTCTCGCAGCGTGTGCGCAACTCCTGATCGTGTTCGTGTGAGGGGTAGGTCTCCCGCCTTTAATGCATTAGCAGCTGCGTTTGAAGGTCCCAAGGACAGAAATCTTTCAACTCCACCTCCTATTGTTAGAAAGCTGTATGCAAAATCTCTGACACCAGAGTCAGCAAAATTGGCACCCAAATCTTCAGTTATAGCAGCACTTAGTTCTTCTTTTGAATCATTCCGTCCATCAAAAGAAAATTTTATACCTCGATCATTTAAAGTGAGCCGAGAGGCCTCAAAGCAGGAGACAAGCAATGGGAAAGATTCTATGAGCAGTATACAAGAAGATATGAAAGAGGGTGAAGCTGAAGACGATGAAGGTCTCCCAGTTTACCCATATGAACGCCTCAAAATAGGATCTGAAGATCCTGTAGCAGACATTGATGTGACCAGGCGAGAGGCTTATTTGTCAGCTGAGGAATTCAAAGAGAAAATTGGGGCGACAAGAAAGGATTTCTACAGGTTGCCCAAATGGAAACAGAACAAACTCAAGATGGCAATTCAGTTATTTTGA 2859 0.4201 MSVSMRDLDPAFQGAGQKAGLEIWRIENLKPVAVPASSFGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGVAAIKTIELDAALGGRAVQYRELQGRETEKFLSYFKPCIIPQEGGVASGFKHVEAEEHTTRLYACQGKHVVRVKEVPFGRSTLTHDDVFILDTQSKIFQFNGSNSSIQERAKALEVLQYIKDNYHDGKCEVATVEDGKLMADADAGEFWGFFGGFAPLPRKTASDDDSIVDSQSPKLLCVVKGQAEPIESDSLIRELLDTNKCYILDCGLEVFVWMGRNTSLDERKSASAAAEALISGPDRLKSHIIRVIEGFETVMFRSKFDTWPQTPNVTVSEDGRGRVAALLKRQGVDVKGLLKVDPVKEEPQPHIDCTGRLQVWRVNGQEKILLQDSDQSKLFSGDCYVFLYSYPGEDREEHLVITWIGKNSVEEERASAILLASKIFESMKFIPAQARIYEGNEPIQFYSILQSLIVFKGGLSDGYKNYIAEKEIPDDTYKEDGVALFRIQGSGPDSMQAIQVDTVASSLNSSYCYILHDGLTVFTWIGSLTSTDDHELVERMLDLIKPELQTKPQKEGSESEQFWDLLGGKSEYPSQKIARAAESDPRLFSCNFSKENLKVTEIYNFSQDDLTTEDIMILYCHSEIFVWVGQLDPKSRLKALTIGEKFLEHDFCMENLSREAPIYVVMEGSEPLFFTRFFKWESAKSAMLGNSFQRRLTIMKNGGTPPLDRPKRRTSVSYGGRSNSAPEKAQRSRSVCATPDRVRVRGRSPAFNALAAAFEGPKDRNLSTPPPIVRKLYAKSLTPESAKLAPKSSVIAALSSSFESFRPSKENFIPRSFKVSREASKQETSNGKDSMSSIQEDMKEGEAEDDEGLPVYPYERLKIGSEDPVADIDVTRREAYLSAEEFKEKIGATRKDFYRLPKWKQNKLKMAIQLF 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0937 952 PANTHER VILLIN 6 942 IPR007122 GO:0051015
Prci9g0937 952 SMART VHP_1 917 952 IPR003128 GO:0003779|GO:0007010
Prci9g0937 952 CDD gelsolin_S5_like 517 608 - -
Prci9g0937 952 Gene3D Severin 613 731 IPR029006 -
Prci9g0937 952 CDD gelsolin_S2_like 139 217 - -
Prci9g0937 952 CDD gelsolin_S3_like 254 343 - -
Prci9g0937 952 FunFam Gelsolin 520 612 - -
Prci9g0937 952 Pfam Gelsolin repeat 638 708 IPR007123 -
Prci9g0937 952 Pfam Gelsolin repeat 31 111 IPR007123 -
Prci9g0937 952 Pfam Gelsolin repeat 149 217 IPR007123 -
Prci9g0937 952 Pfam Gelsolin repeat 275 336 IPR007123 -
Prci9g0937 952 FunFam Villin-4 385 519 - -
Prci9g0937 952 CDD gelsolin_S1_like 12 124 - -
Prci9g0937 952 Gene3D Severin 248 355 IPR029006 -
Prci9g0937 952 SMART VILL_6 622 718 IPR007122 GO:0051015
Prci9g0937 952 SMART VILL_6 519 606 IPR007122 GO:0051015
Prci9g0937 952 SMART VILL_6 137 234 IPR007122 GO:0051015
Prci9g0937 952 SMART VILL_6 392 489 IPR007122 GO:0051015
Prci9g0937 952 SMART VILL_6 254 344 IPR007122 GO:0051015
Prci9g0937 952 SMART VILL_6 19 117 IPR007122 GO:0051015
Prci9g0937 952 FunFam Gelsolin 6 131 - -
Prci9g0937 952 Pfam Villin headpiece domain 917 952 IPR003128 GO:0003779|GO:0007010
Prci9g0937 952 MobiDBLite consensus disorder prediction 753 768 - -
Prci9g0937 952 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Prci9g0937 952 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Prci9g0937 952 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Prci9g0937 952 PRINTS Gelsolin family signature 672 691 IPR007122 GO:0051015
Prci9g0937 952 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Prci9g0937 952 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Prci9g0937 952 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Prci9g0937 952 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Prci9g0937 952 SUPERFAMILY Actin depolymerizing proteins 511 613 - -
Prci9g0937 952 ProSiteProfiles Headpiece (HP) domain profile. 887 952 IPR003128 GO:0003779|GO:0007010
Prci9g0937 952 MobiDBLite consensus disorder prediction 737 771 - -
Prci9g0937 952 SUPERFAMILY Actin depolymerizing proteins 595 716 - -
Prci9g0937 952 CDD gelsolin_S6_like 621 717 - -
Prci9g0937 952 FunFam Villin-4 248 354 - -
Prci9g0937 952 SUPERFAMILY Actin depolymerizing proteins 129 243 - -
Prci9g0937 952 Gene3D Severin 522 612 IPR029006 -
Prci9g0937 952 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Prci9g0937 952 Gene3D Villin headpiece domain 873 952 IPR036886 GO:0003779|GO:0007010
Prci9g0937 952 Gene3D Severin 133 247 IPR029006 -
Prci9g0937 952 MobiDBLite consensus disorder prediction 854 888 - -
Prci9g0937 952 FunFam Villin-like 1 132 247 - -
Prci9g0937 952 SUPERFAMILY VHP, Villin headpiece domain 877 952 IPR036886 GO:0003779|GO:0007010
Prci9g0937 952 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Prci9g0937 952 Gene3D Severin 7 132 IPR029006 -
Prci9g0937 952 CDD gelsolin_S4_like 388 485 - -
Prci9g0937 952 SUPERFAMILY Actin depolymerizing proteins 224 349 - -
Prci9g0937 952 Gene3D Severin 380 521 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0937 Prci-Chr9 23981438 23993066 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0937 - - zju:107403659 1530.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g0937 9 23981438 23993066 Prci4g1418 4 11481778 11494677 CCT