Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0746 ATGGAACGGCCAACAGTATTGTTTTCATTTCTTCTAACGCTTCACTTATCTGTATCAGGGGTTTTTTCAACGACATTCACCATAGTTAACAAATGCGGCTACACAGTATGGCCGGGCATCCTTTCAAACGCCGGCGTCACTCCTCTTTCTTCCACCGGTTTTGTTCTTCAGACCGGCGAGTCTAAGACCATCTCCGCACCCACTTCTTGGGGTGGCCGCTTCTGGGGCCGAACTCAGTGCTCCCAGGATTCCACCGGCATGTTTACGTGCGTCACCGGTGACTGTGGCTCTGGCAAGATGGAATGCGGAGGGAAAGGAGCCTCCCCGCCGGCGACGTTGGCGGAATTCACTTTAGACGGAGCCGGAGGGCTTGATTTCTTCGATGTAAGCTTGGTAGACGGATATAACGTGCCTATGATGGTGGTTCCTCAAGGTGGTTCCGGTGACAACTGCACGAGCACGGGCTGTGTGTCGGATCTGAACGGCGCGTGTCCCTCAGAGCTAAAGGTGATGAGCGATGACGGGAGGGAAGGGGTGGCATGCAAGAGCGCGTGCGAGGCGTTTGGGTCGCCGCGGTACTGTTGCAGCGGCGCGTATGGATCTCCGAACACCTGCAAGCCATCGTCATACTCGCAAATATTCAAGAACGCGTGCCCACGCGCCTACAGCTACGCTTACGACGACAAGACAAGCACGTTCACATGTGCGTCTGCCGATTATACCATCACCTTCTGTCCATCCCCAAACACCAGTCAGAAAGCATCACAAGGACAGAGCACAAACAGCCCATCTTTTCCGGCGGCTCCGAGCTCGCCGACACAGGACATAGACGGCCCCAGCATGGTGTACGTGGGTGCTGCTGCTTTCGATCAAAGCGAGATATCGGCCTCCACGTGCATCCACGTGTTCGAATCCCTATTCCTCGCCGGCATCATCATCGTATCAGTGGCTATCCGGGGATTCTGA 966 0.5538 MERPTVLFSFLLTLHLSVSGVFSTTFTIVNKCGYTVWPGILSNAGVTPLSSTGFVLQTGESKTISAPTSWGGRFWGRTQCSQDSTGMFTCVTGDCGSGKMECGGKGASPPATLAEFTLDGAGGLDFFDVSLVDGYNVPMMVVPQGGSGDNCTSTGCVSDLNGACPSELKVMSDDGREGVACKSACEAFGSPRYCCSGAYGSPNTCKPSSYSQIFKNACPRAYSYAYDDKTSTFTCASADYTITFCPSPNTSQKASQGQSTNSPSFPAAPSSPTQDIDGPSMVYVGAAAFDQSEISASTCIHVFESLFLAGIIIVSVAIRGF 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0746 321 ProSiteProfiles Thaumatin family profile. 23 246 IPR001938 -
Prci8g0746 321 MobiDBLite consensus disorder prediction 251 274 - -
Prci8g0746 321 ProSitePatterns Thaumatin family signature. 86 102 IPR017949 -
Prci8g0746 321 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Prci8g0746 321 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Prci8g0746 321 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Prci8g0746 321 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Prci8g0746 321 PANTHER OS03G0233200 PROTEIN 12 246 IPR001938 -
Prci8g0746 321 Pfam Thaumatin family 30 246 IPR001938 -
Prci8g0746 321 SUPERFAMILY Osmotin, thaumatin-like protein 24 247 IPR037176 -
Prci8g0746 321 FunFam THAUMATIN-LIKE PROTEIN 1 24 246 - -
Prci8g0746 321 CDD TLP-PA 25 245 - -
Prci8g0746 321 Gene3D Thaumatin 24 246 IPR037176 -
Prci8g0746 321 SMART tha2 26 246 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0746 Prci-Chr8 4763669 4765790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0746 10 261 Receptor kinase-like Gene Family AT5G38280 55.294 1.52e-94 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0746 - - gmx:100787631 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0746 8 4763669 4765790 Prci8g0746 8 4763669 4765790 ECH
Prci14g0122 14 1012214 1015540 Prci8g0746 8 4763669 4765790 ECH