Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0122 ATGGGACACTTTCTTCGCTTCCTCTTTCTTCTCATCATCCTTGCATTATCTTTCCTCTCAGAGGTGCAATCGGCATCATTCAAGATTGTGAATAAGTGTCGCCACACGATTTGGCCGGGCTTGCTTTCTGGCGCCACTTCCCCACAGCCTCCCACCACTGGATTCGCTCTTCAAAGTGGCAAGTCAAAGACTATAAACATCCCGAAATCTTGGTCGGGTCGGATATGGGCTCGGTCCCTTTGTGGTCGTGATTCTGACGGAAAGTTCTCCTGCCTCACTGCAGACTGCGGCTCTGGTCAAGTAGAGTGCACCGGCGGAGCTAAGCCGCCCGCGACGTTGGCTGAGTTCACTCTCAATGGCGCCGACGGGTTAGATTTCTACGACGTAAGCTTGGTCGACGGCTACAACCTGCCGATGCTGATCGTTGCGAAAGGTGGAAAACGGGGTGGATGTAGCGCCACCGGGTGTTTGGTAGACCTGAACGGAGCGTGCCCGGCCGATCTTAGGGTGGCGCGTGGTAATGGGACCGGGACTGGTGGTGAAGGCGTGGCCTGCAGAAGCGCGTGTGAGGCTTTTGGCGATCCGCAGTATTGTTGCAGTGAGGCGTACTCCACACCCGACACGTGTCATCCGTCAGTATATTCGGAATTCTTCAAGCATGCTTGCCCGCGCGCGTATAGCTACGCTTACGATGACAAGACAAGCACATATACGTGTGCTTCTGCTGACTACTTGATCATTTTCTGCCCCTTGCCCTACACCAGCCAAAAGTTGCTGGGAACACGAAAAGATGGCGCAACACTTCCTCTTGTAAACAAGACCATGATGTACTTAAAGCATTCAGGAGTTTCTTCATCAAAAGGTCTGAATCAAAAGCAGATTATGGCTTACATTGTCTCTCTTGCAGCATCATCTTTCCTGTTTTACTCTCCTTTTCACCTATCATGA 948 0.5179 MGHFLRFLFLLIILALSFLSEVQSASFKIVNKCRHTIWPGLLSGATSPQPPTTGFALQSGKSKTINIPKSWSGRIWARSLCGRDSDGKFSCLTADCGSGQVECTGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAKGGKRGGCSATGCLVDLNGACPADLRVARGNGTGTGGEGVACRSACEAFGDPQYCCSEAYSTPDTCHPSVYSEFFKHACPRAYSYAYDDKTSTYTCASADYLIIFCPLPYTSQKLLGTRKDGATLPLVNKTMMYLKHSGVSSSKGLNQKQIMAYIVSLAASSFLFYSPFHLS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0122 315 SMART tha2 27 250 IPR001938 -
Prci14g0122 315 Gene3D Thaumatin 25 250 IPR037176 -
Prci14g0122 315 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Prci14g0122 315 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Prci14g0122 315 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Prci14g0122 315 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Prci14g0122 315 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Prci14g0122 315 SUPERFAMILY Osmotin, thaumatin-like protein 26 250 IPR037176 -
Prci14g0122 315 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Prci14g0122 315 Pfam Thaumatin family 31 250 IPR001938 -
Prci14g0122 315 CDD TLP-PA 26 249 - -
Prci14g0122 315 ProSiteProfiles Thaumatin family profile. 24 250 IPR001938 -
Prci14g0122 315 PANTHER OS03G0233200 PROTEIN 11 250 IPR001938 -
Prci14g0122 315 FunFam THAUMATIN-LIKE PROTEIN 1 25 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0122 Prci-Chr14 1012214 1015540 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0122 2 267 Receptor kinase-like Gene Family AT5G38280 47.212 1.26e-83 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0122 - - gmx:100802252 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g0122 14 1012214 1015540 Prci14g0122 14 1012214 1015540 ECH
Prci14g0122 14 1012214 1015540 Prci8g0746 8 4763669 4765790 ECH