Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0548 ATGTCTGGGTTGTATAATCAAATTTCCTCACCTGCACCTGTAAGGGCCAATTCACCAAACATAAACGTGAGAAGCAGTTTTGATGTTGAAAGTCAGTACTTAGCGGAGCTGCTGGCAGAACACCAGAAGCTTACACCTTTCATGGAAGTCCTTCCTCTATGCAGTCGACTCCTGAATCAAGAGATTTTAAGGGTTTCTGGAAAGAACGGACTGATGCTGAACCAAGGGTTTAGTGACTTCGATAGAATGCAGTTCGGAAGTCCTAGTCTTATGGCTTCACCAGATATAATACCAAATTTCACTGGCTGGAACAGCCTATCACATGATAGGTTTGCTGGAGCACAGGGATTGAACGTGGATTGGCAAACAGCACCAATTGTCCCGAGTTCTCCCATTGTGAAGAGGATATTGCGCTTGGATATTCCTAAGGATGCCTATCCAAATGTAACACATTTCAATTTTGTTGGCCGCCTTCTTGGCCCCCGAGGTAATTCACTGAAGCGGGTAGAGGCTACAACGGGTTGTCGTGTTTTTATCAGAGGGAAAGGCTCAATAAAAGACCCAGACAAGGAGGAGTTGCTAAGGGGAAGGCCAGGCTATGAGCACCTGAATGATCCTCTGCACATTTTGATTGAGGCTGAACTGCCTGCCAACATCCTTGATATTAGGCTGAGGCAAGCACAGGAAATCATAGAAGAGCTGCTGAAACCTGTGGATGAGTCACAAGACTTTTACAAGAGGCAACAACTAAGAGAACTTGCAATGCTTAATTCCAACTTCAGAGAAGAGAGCCCTCAACTGAGTGGTAGTGTCTCTCCCTTCACTTCCAATGAAATAAAAAGGGCCAAAACTGATCAATAG 861 0.4506 MSGLYNQISSPAPVRANSPNINVRSSFDVESQYLAELLAEHQKLTPFMEVLPLCSRLLNQEILRVSGKNGLMLNQGFSDFDRMQFGSPSLMASPDIIPNFTGWNSLSHDRFAGAQGLNVDWQTAPIVPSSPIVKRILRLDIPKDAYPNVTHFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPDKEELLRGRPGYEHLNDPLHILIEAELPANILDIRLRQAQEIIEELLKPVDESQDFYKRQQLRELAMLNSNFREESPQLSGSVSPFTSNEIKRAKTDQ 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0548 286 Pfam KH domain 153 186 IPR004088 GO:0003723
Prci8g0548 286 Gene3D K Homology domain, type 1 24 267 IPR036612 GO:0003723
Prci8g0548 286 MobiDBLite consensus disorder prediction 261 279 - -
Prci8g0548 286 PANTHER RNA-BINDING PROTEIN RELATED 30 274 IPR045071 -
Prci8g0548 286 Pfam Homodimerisation region of STAR domain protein 30 68 IPR032377 -
Prci8g0548 286 MobiDBLite consensus disorder prediction 261 286 - -
Prci8g0548 286 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 151 261 IPR036612 GO:0003723
Prci8g0548 286 SMART kh_6 133 236 IPR004087 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0548 Prci-Chr8 3556117 3559778 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0548 K14945 - gmx:100815901 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0548 8 3556117 3559778 Prci12g0012 12 121021 131351 CCT
Prci8g0548 8 3556117 3559778 Prci8g0548 8 3556117 3559778 ECH