Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0012 ATGTCAGGTTTGTATAATCCCAACTTCTCCCCTGCTAGAGCCGCTTCGCCTCAGATTAGAAGCAACCCAGAAACCGAAAGCCAGTACTTGTCGGAGCTGCTAGCAGAGCATCAGAAGCTTGGACCCTTCATGCAAGTCCTTCCGATATGCAGTCGACTGTTAAATCAAGAGATATTAAGGGTTTCAGGAATGCTGTCCAACCAAGGATTTGGTGACTTTGATAGACTGCGGCATAGAAGCCCTAGTCCTATGGCTTCTTCGAACTTAATGTCAAATGTTTCTGGTACAGGTTTGAGTGGCTGGAATAATCTTCCTCCAGAGAGATTATGTGGACCCCTTGGAATGACGATGGATTGGCAAGGTGCTCCTGCAAGTCCTAGTTCATACACTGTGAAGAGAATCTTACGCTTGGACATTCCAGTAGATACATACCCCAATTTCAATTTTGTTGGAAGACTTCTGGGACCTAGAGGCAATTCTCTGAAGCGAGTAGAAGCTACTACTGGTTGCCGTGTGTATATTAGAGGAAAGGGATCGATAAAGGATCCAGATAAGGAAGAGAAATTGCGAGGAAGACCAGGCTATGAGCATCTCAATGAACAGCTGCACATTTTAATTGAGGCTGATTTACCTGCTAATGTTGTTGATTTAAGGCTCAGACAGGCGCAGGAAATTATAGAAGAATTGCTCAAACCTGTGGATGAGTCACAGGACTTCATCAAGAGGCAGCAATTGCGTGAGTTAGCTATGCTGAATTCAAACTACAGAGAGGAGAGTCCTGGACCAAGTGGTAGCAGTGCATCACCATTCAATTCTAGTGGAATGAAAAGAGCAAAAACCGGTCGCTAG 849 0.4488 MSGLYNPNFSPARAASPQIRSNPETESQYLSELLAEHQKLGPFMQVLPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLSGWNNLPPERLCGPLGMTMDWQGAPASPSSYTVKRILRLDIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEQLHILIEADLPANVVDLRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSNYREESPGPSGSSASPFNSSGMKRAKTGR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0012 282 MobiDBLite consensus disorder prediction 253 282 - -
Prci12g0012 282 MobiDBLite consensus disorder prediction 256 282 - -
Prci12g0012 282 Pfam Homodimerisation region of STAR domain protein 23 72 IPR032377 -
Prci12g0012 282 SMART kh_6 131 231 IPR004087 GO:0003676
Prci12g0012 282 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 137 256 IPR036612 GO:0003723
Prci12g0012 282 Pfam KH domain 148 184 IPR004088 GO:0003723
Prci12g0012 282 Gene3D K Homology domain, type 1 19 262 IPR036612 GO:0003723
Prci12g0012 282 PANTHER RNA-BINDING PROTEIN RELATED 19 273 IPR045071 -
Prci12g0012 282 ProSiteProfiles Type-1 KH domain profile. 148 205 - -
Prci12g0012 282 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0012 Prci-Chr12 121021 131351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0012 K14945 - gmx:100816420 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0548 8 3556117 3559778 Prci12g0012 12 121021 131351 CCT