Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0048 ATGGCGTTTTGGAGATCTTACGCCTTCCGAACTCTGACGTTCGCTGCTACTCTTCTGCTTCTCCTTCATGGTGCTCACTGTTTCTATCTCCCTGGCGTCGCTCCGCAGGATTTTCATAAGGGAGATACATTGCAAGTGAAAGTGAACAAATTAACATCGACGAAGACTCAACTGCCTTACTCATATTATTCTCTCCCTTATTGTAGTCCTGGAAAAATTTTGGATAGTGCAGAAAATCTTGGTGAAGTGCTTCGTGGTGATCGCATTGAAAATTCTCGATATGTGTTCAAAATGCGTGAGCCACAAATGTGCAATGTTGTCTGCAAGCTTAAACTTGATGCCAAAACTGCAAAGGAGTTTAAAGAGAAGATTGATGATGAGTACCGTGTGAACATGATCCTTGATAACCTTCCTCTTGTTGTTCCTCTAAAGCGGATGGATCAGGATTCTACTGTTTATCAGCTTGGTTTCCATGTTGGGCTTAAGGGGCAATATAGTGGGAGTAAAGAGGAGAAGTATTTTATCCACAACCACTTGTCGTTTATTGTCAAGTTTCATAAAGACGACGTAACTGAATCGGCTAGAATTGTGGGTTTTGAGGTTAAGCCGTTCAGTGTTAAACATGAATACGAAGGGAAATGGGAGGATAAGACCCGATTGATGACGTGTGACCCTCATACTAAACGCACAGTTGTTAATTCCAACACTCCTCAAGAGGTTGAAGAGAATAGTGAGATAATATTCACGTATGATGTTGAGTTTCAGCCGAGTGATGTAAAGTGGGCTTCAAGGTGGGATGCTTATTTGCTGATGAGTGATGACCAAATTCACTGGTTCTCAATTGTAAACTCGTTGATGATTGTTCTCTTCCTCTCGGGTATGGTGGCAATGATAATGCTGCGCACACTTTACCGTGATATCTCGAAATACAATGAGCTTGAGACGCAGGAAGAAGCCCAAGAAGAGACTGGTTGGAAGCTTGTCCATGGGGATGTCTTTAGGCCCCCTAACAACTCGGAGTTGCTGTGTGTATATGTTGGAACCGGTGTCCAGTTTTTTGGAATGATACTAGTAACCATGATATTTGCTATCCTTGGGTTCCTTTCTCCTTCAAACCGAGGTGGACTAATGACAGCCATGCTTTTGCTTTGGGTCTTCATGGGACTTTTTGCCGGGTACTCCTCTGCCCGCTTATATAAAATGTTTAAAGGAACAGAGTGGAAGAAAATCGCCTTCAGGACTGCAGTCATGTTTCCTGCAATCGTCTCTTCCATTTTCTTTGTACTAAATGCTCTCATCTGGGGCGAAAAATCATCTGGGGCTGTGCCTTTTGGTACTATGTTTGCACTGATGTTTTTATGGTTTGGGATCTCGGTTCCGCTGGTTTTTGTGGGCGGCTATGTTGGATCCAAGAAGCCTGCAATTGAGAATCCCGTGAAGACTAACAAAATCCCGAGGCAGATCCCCGAGCAGGCCTGGTACATGAACCCGGTTTTCTCAGTCCTGATTGGGGGAATACTTCCATTTGGAGCCGTTTTCATCGAGCTGTTTTTCATCCTCACCTCAATTTGGTTGAACCAGTTTTATTACATCTTCGGTTTCCTCTTTTTGGTCTTCGTAATCCTGGTCATTACTTGTGCGGAGATAACCATTGTGCTGTGCTACTTCCAGCTGTGCAGTGAGGATTACTTGTGGTGGTGGCGGTCATACCTCACATCCGGCTCTTCTGCACTCTACCTATTCCTTTACGCGACATTCTACTTCTTCACCAAGCTTGAAATCACCAAGATGGTGTCTGGAATCTTGTACTTTGGGTACATGCTCATAGCTTCGTATGCATTTTTTGTGCTAACCGGTACCATTGGATTCTATGCGTGCTTCTGGTTCACAAGGCTTATCTACTCCTCGGTGAAAATTGATTAA 1923 0.4384 MAFWRSYAFRTLTFAATLLLLLHGAHCFYLPGVAPQDFHKGDTLQVKVNKLTSTKTQLPYSYYSLPYCSPGKILDSAENLGEVLRGDRIENSRYVFKMREPQMCNVVCKLKLDAKTAKEFKEKIDDEYRVNMILDNLPLVVPLKRMDQDSTVYQLGFHVGLKGQYSGSKEEKYFIHNHLSFIVKFHKDDVTESARIVGFEVKPFSVKHEYEGKWEDKTRLMTCDPHTKRTVVNSNTPQEVEENSEIIFTYDVEFQPSDVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNSELLCVYVGTGVQFFGMILVTMIFAILGFLSPSNRGGLMTAMLLLWVFMGLFAGYSSARLYKMFKGTEWKKIAFRTAVMFPAIVSSIFFVLNALIWGEKSSGAVPFGTMFALMFLWFGISVPLVFVGGYVGSKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFVILVITCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKMVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0048 640 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 27 640 IPR004240 GO:0016020
Prci8g0048 640 Pfam Endomembrane protein 70 59 596 IPR004240 GO:0016020
Prci8g0048 640 SUPERFAMILY MFS general substrate transporter 278 461 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0048 Prci-Chr8 334176 337993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0048 15 640 Miscellaneous Gene Families AT5G10840 84.873 0.0 1102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0048 K17086 - gmx:100810506 1146.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1100 2 8167409 8172164 Prci8g0048 8 334176 337993 CCT
Prci8g0048 8 334176 337993 Prci8g0048 8 334176 337993 ECH