Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1100 ATGGCGTTTTTGAGATCTCTCGCCTCCCGTACGCTGATGTTCTCTGCAATTCTTCTGCTTCTCATCCATGGGGCTCACTGTTTCTACCTCCCCGGCGTTGCTCCGCAGGACTTTGAACAGGGAGATACATTGCAAGTGAAAGTTAACAAATTAACATCAACAAAGACTCAACTTCCTTACTCATATTATTCACTTCCGTACTGTCACCCTGAGAAAATACAGGATAGTGCAGAAAATCTGGGGGAAGTGCTACGTGGTGACCGGATTGAAAATTCTCTTTATGTGTTTAAAATGCGTGAGCCACAAATGTGCAATATATTGTGTAAGCTGAAACTTGATGGTAAAACTGCAAAGGAGTTTAAAGAGAAGATTGATGATGAGTATCGGGTGAACATGATCCTAGACAACCTTCCTCTGGTTGTTCCCCTAAAACGAATGGACCAGGATTCTACTGTTTATCAGCTTGGTTTCCATGTTGGGCTCAAAGGCCAATATACTGGGAGCAAGGAGGAGAAGTATTTCATCCACAACCATTTGGCATTTACTGTCAAGTATCATAAGGATTCGCAGACTGAATCTGCCAGAATAGTTGGTTTTGAGGTTAAGCCATTCAGTGTTAAACATGAGTTTGACGGAAAATGGGACAAGAAAAAGACCCGTTTAACAACCTGTGATCCTCACACTAAACGCACAGTTGTCAACTCAAACACTCCTCAAGAGGTCGAAGAGAACAAGGAAATTATATTCACATACGATGTTGAATTCCAGCCAAGTGATGTGAAGTGGGCTTCGCGGTGGGACGCCTATCTGCTCATGACTGATGACCAAATTCACTGGTTCTCTATTGTGAACTCATTGATGATAGTTCTCTTCCTCTCGGGCATGGTGGCGATGATAATGCTTCGAACACTTTATCGTGACATATCAAAATACAATGAGCTTGAGACACAAGAGGAAGCCCAAGAAGAGACTGGTTGGAAGCTTGTCCACGGCGATGTGTTTAGACCCCCTAACAACTCGGATCTGCTCTGTGTCTATGTTGGAACCGGTGTTCAATTTTTCGGGATGTTATTAGTGACAATGATGTTTGCCATCCTTGGTTTCCTCTCTCCTTCAAACCGAGGTGCATTGATGACAGCTATGCTTTTGCTTTGGGTCTTCATGGGGCTTTTTGCTGGTTACTCTTCTTCTCGCTTGTACAAAATGTTCAAAGGAGCAGAGTGGAAGACAATTGCCCTCAGGACTGCACTTATGTTCCCAGCAACTGTCTCTGCCATTTTCTTTGTATTGAACTCTCTCATATGGGGTCAAAAATCATCTGGAGCTGTGCCTTTCGGTACCATGTTTGCTTTGATCTTTTTATGGTTTGGGATCTCTGTTCCACTTGTTTTTGTGGGTAGTTATGTTGGATTCAAGAAGCCTGCTATTGAGAGTCCCGTGAAGACGAACAAAATCCCAAGGCAGATTCCTGAGCAGGCTTGGTACATGAACCCAGCCTTCTCAGTTCTGATCGGAGGAATACTTCCATTTGGAGCCGTTTTCATCGAGCTTTTCTTTATTCTCACCTCAATCTGGTTGAATCAATTTTACTACATCTTCGGTTTCCTCTTTTTGGTCTTCATCATCCTCATCGTCACTTGTGCAGAAATAACCGTTGTGCTTTGCTACTTCCAGTTGTGCAGTGAGGATTACCTGTGGTGGTGGCGGTCATACCTCACATCTGGATCTTCTGCACTTTACCTCTTCCTTTATGCCACATTTTATTTCTTCACCAAGCTTGAAATCACAAAGATGGTGTCTGCCATGTTGTACTTTGGTTACATGCTTATAGCTTCTTACGCATTTTTCGTGCTAACCGGCACCATCGGGTTCTATGCGTGCTTTTGGTTCACAAGGCTTATCTACTCCTCGGTGAAAATCGATTAG 1926 0.4346 MAFLRSLASRTLMFSAILLLLIHGAHCFYLPGVAPQDFEQGDTLQVKVNKLTSTKTQLPYSYYSLPYCHPEKIQDSAENLGEVLRGDRIENSLYVFKMREPQMCNILCKLKLDGKTAKEFKEKIDDEYRVNMILDNLPLVVPLKRMDQDSTVYQLGFHVGLKGQYTGSKEEKYFIHNHLAFTVKYHKDSQTESARIVGFEVKPFSVKHEFDGKWDKKKTRLTTCDPHTKRTVVNSNTPQEVEENKEIIFTYDVEFQPSDVKWASRWDAYLLMTDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGVQFFGMLLVTMMFAILGFLSPSNRGALMTAMLLLWVFMGLFAGYSSSRLYKMFKGAEWKTIALRTALMFPATVSAIFFVLNSLIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIESPVKTNKIPRQIPEQAWYMNPAFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILIVTCAEITVVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKMVSAMLYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1100 641 Pfam Endomembrane protein 70 59 597 IPR004240 GO:0016020
Prci2g1100 641 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 27 641 IPR004240 GO:0016020
Prci2g1100 641 SUPERFAMILY MFS general substrate transporter 279 465 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1100 Prci-Chr2 8167409 8172164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1100 1 641 Miscellaneous Gene Families AT5G10840 84.699 0.0 1112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1100 K17086 - gmx:100780976 1167.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1100 2 8167409 8172164 Prci8g0048 8 334176 337993 CCT
Prci2g1100 2 8167409 8172164 Prci2g1100 2 8167409 8172164 ECH