Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0046 ATGCAATCTGAATCCTGTACGCACTGCATGAGATCAGTGAGGTATTCGTCATCTGAATTGACTACAGATATTGTCGTAAATGTTGGCGAAGTCAAGTTTTTCCTGCACAAGTTCCCTCTTCTGTCCAAGAGCAATCGATTACAAAAGCTGGTATCGAAAGCTAATGAAGATGATTCTGACGAAATTTTCTTGAATGAATTCCCTGGAGGGGCCAAGGCATTTGAATTATGTGCAAAGTTCTGCTATGGAATGACAGTTACTCTTAATGCCTACAACGTTGTGGCTGCTCGCTGTGCAGCTGAGCATCTTGAAATGACTGAGGATGTTGATAGGGGAAACTTAATTTTTAAAATTGAGGTATTTCTTAACTCAAGCATCTTTCGGAGCTGGAAAGATTCCATAATTGTTCTACAAACTACAAAATCTCTTCTCCCTTGGTCTGAGGATCTGAAGATCATTGGCAGATGTATAGATTCTATAGCTTCTAAAACTTCGGTGGACCCAACTAACATCAGATGGTCCTACACACACAACCGAAAACTAACTGAGCCTGATAGAATTACTGAACACAGGATGACATATAAAGAGAAAGTTGAGTCTGTTCCTAAGGATTGGTGGGTTGAAGATATTTGTGAGCTGGACATTGATCTTTACAAACGAGTAATGATTAATGTGAAGTCAAAGGGAAGAATGGATGGTCCTTTAATTGGGGAGGCACTGAAAACATATGCGATCAGGTGGTTGCCTGATTCTATTGAGGCATTGGTTTCTGAAGCTCATGCACAAAGAAACAAATTTCTGGTGGAAACAATTGTCTGTCTATTACCATCTGACGGTGCTGCGGGTTGTTCTTGTAGTTTCCTTTTGAAGCTATTGAAAGTGGCCATACTAGTAGGTGCAGATGAGTCGTCAAAAGAAGAATTAGTGAAAAGCACCTGCCTTAAATTGCATGAGGCTTCTGTCAAAGATCTACTGATCCCTGCAAGGCCTCCTCAGACTACCATATATGATGTTCAGTTGGTACAATGTCTTTTGAATCGATGCATGAATGAAAAGGGCAGCAGCTGCAATGTGGAAGTTGCAGGGAAGAAAGATAAAGGAAATGACAAAGCAATATTTGCACATATGTTCTTTGTGAAGATCGGTCAGTTGGTGGACAATTTTCTTGTCGAAATTGCACATGATCCGAATCTCAGCCTTTCTAGGTTTGTTGACTTGTCGCAAACAGTACCGGTATTTGCCAGACCAAATCATGATGGTCTGTACAGAGCTATTGACATATACTTGAAGGAGCACCCAAATGTGACAAAAGCTGAAAGGAAGAAGCTATGTGGACTGATGGACGTGAAGAAATTGTCAGTGGATGCATCTATGCATGCCGCACAGAATGAGCAGCTTCCACTTCGGGTTGTAGTGCAGGTTCTCTTTTTTGAGCAGCTCAGAACTTCTGCCAGCGCTCGCGCTCTTGGTGATAAGAATTCATGTAAGCCTTTGACGTACGCAGTGAGCACAGATGAAGAATGTGAGACAATAGTCGGTGAGAAGCACCAATCGCTTGAGAACCAGATGTGTAATTTGAAGATGAAGGAAGAAGAATTCCCCAAGAATGGGAGACTGAGCAAGACAAATAGCAAAAGCAGCAGACGTGGAATGCAATTACTTCCTTCACGTTCAAGGAGAATCTTTGACAAGTTATGGATTGGTGGCAAAGGACAAGGAGAGTACAGGGGATCAGAGACATCAGGAAGTTCAAATAGTCCGACATCTATTGTCCCGGGATACACCAAGTCATCAGGTTCATCATCTAGGCACAGGAGGTACTCTATTTCTTGA 1833 0.4206 MQSESCTHCMRSVRYSSSELTTDIVVNVGEVKFFLHKFPLLSKSNRLQKLVSKANEDDSDEIFLNEFPGGAKAFELCAKFCYGMTVTLNAYNVVAARCAAEHLEMTEDVDRGNLIFKIEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKIIGRCIDSIASKTSVDPTNIRWSYTHNRKLTEPDRITEHRMTYKEKVESVPKDWWVEDICELDIDLYKRVMINVKSKGRMDGPLIGEALKTYAIRWLPDSIEALVSEAHAQRNKFLVETIVCLLPSDGAAGCSCSFLLKLLKVAILVGADESSKEELVKSTCLKLHEASVKDLLIPARPPQTTIYDVQLVQCLLNRCMNEKGSSCNVEVAGKKDKGNDKAIFAHMFFVKIGQLVDNFLVEIAHDPNLSLSRFVDLSQTVPVFARPNHDGLYRAIDIYLKEHPNVTKAERKKLCGLMDVKKLSVDASMHAAQNEQLPLRVVVQVLFFEQLRTSASARALGDKNSCKPLTYAVSTDEECETIVGEKHQSLENQMCNLKMKEEEFPKNGRLSKTNSKSSRRGMQLLPSRSRRIFDKLWIGGKGQGEYRGSETSGSSNSPTSIVPGYTKSSGSSSRHRRYSIS 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0046 610 Pfam NPH3 family 204 457 IPR027356 -
Prci8g0046 610 Pfam BTB/POZ domain 17 107 IPR000210 GO:0005515
Prci8g0046 610 SUPERFAMILY POZ domain 15 109 IPR011333 -
Prci8g0046 610 CDD BTB_POZ_NPY3-like 13 117 - -
Prci8g0046 610 Gene3D Potassium Channel Kv1.1; Chain A 2 113 IPR011333 -
Prci8g0046 610 MobiDBLite consensus disorder prediction 576 610 - -
Prci8g0046 610 MobiDBLite consensus disorder prediction 569 610 - -
Prci8g0046 610 MobiDBLite consensus disorder prediction 539 553 - -
Prci8g0046 610 MobiDBLite consensus disorder prediction 532 554 - -
Prci8g0046 610 PANTHER OS12G0117600 PROTEIN 18 549 IPR043454 -
Prci8g0046 610 ProSiteProfiles BTB domain profile. 22 90 IPR000210 GO:0005515
Prci8g0046 610 ProSiteProfiles NPH3 domain profile. 204 481 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0046 Prci-Chr8 311004 314641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0046 15 486 EF-hand Containing Proteins AT3G44820 34.132 1.17e-89 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0046 - - gmx:100790291 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1099 2 8142279 8146875 Prci8g0046 8 311004 314641 CCT