Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1099 ATGAAGTTTATGAAGTTGGGTTCGAAGCCTAATGCTCTTCAAGCTGACGGAAAGTCTATCATCAGGTATGTGTCGACCGATTTGGCCACTGATGTGATCATTAATGTTGGTGAAGTGAAGTTTTACCTTCATAAGTTTCCTCTCTTGTCTAAGAGTAATCAATTGCAGAAGCTGGTATCGAAGGCAGATGAAGAGAATTCTGATGAAATATACATAGCTGATTTCCCTGGAGGTCCTAAAGCCTTTGAAATATGCGCAAAATTCTGCTATGGAATAACTGTTACTCTTAATGCGTACAATGTTGTGGCTGCCCGTTGTGCAGCAGAGTACCTTGAGATGACTGAGGATATCGACAAGGGGAACTTGATTTTTAAGATTGAGGTGTTTCTAAACTCAAGTATCTTCCGTAGCTGGAAGGATTCCATCATTGTTCTCCAGACTACTAAATCTCTTCTGCCATGGTCTGAGGATCTGAAGATCATTGGAAGATGCACAGATTCCATAGCTTCAAAAACTTCTGTGAACCCAGAACACATCACGTGGTCCTACACGTACAACCGGAAACTAAGTGAGGATGATAAAATTACTGAGGACCAGATGATATGCCAAGAGAAAATTGAGTCAGTTCCCAAGGATTGGTGGGTTGAAGATGTTTGCGAGTTGGACATTGATCTTTACAAAAGAGTAATGATTGCTGTCAAATCAAAGGGAAGAATGGATGGTGTCATAATCGGAGAGGCTCTTGAGGTCTATGCAGTCAGATGGTTACCTGAATCTGTTGAGGCATTAGTTTCTGATGCTCATGCTCAGAGGAATAGATTAGTTGAAACAATTGTCTGTTTATTGCCGTTTGACTATGGTGGGGGCTGTTCATGTAGCTTCTTGCTGAAGCTATTGAAAGTGGCCATACTAGTTGGAGCACATGAATCATCGCGTGAAGAATTGATGAAGAACATTAGCTTCAGATTGCATGAAGCTTCTGTTAAAGACTTGTTGATCCCTGCCAGGTCTCCGCAGACAACCATATACGATGTTCAATTAGTACAATGTCTTTTGAATCGATGCATGACTTCTGAAAGGGAAAGCCATGATATGGAACTTGATGAGTGCACGGACAAAGGAAAAAGCTTGTTGAACATTGGCAAGTTAGTGGATGGTTACCTGGCAGAAATTGCACGTGATCCCAGTCTCAATATGTCTAGTTTCATTGAATTGTTACAGTCAATTCCAGAGTTTGCTCGGCCAAAGCACGATGGTCTCTACAGAGCTATTGACATATACTTGAAGGAGCACCCGAGCCTAACAAAAGCAGAAAGGAAGAAGATATGTGGTTTGATGGATGTGAAGAAGTTGACAGTGGATGCTTCAATGCATGCTGCACAGAACGAGCGGCTTCCACTCCGAGTTGTAGTTCAGGTTCTCTTCCATGAGCAGCTTAGAGCTTCTACGAAGGTTCAAGCTCTCAGCAGCAATCAATGTGACGAGGATTGCGAGAAAACACTGGGAGAGAATTGCCAGTCATTCAAAGATCAGAGGAGCCATTTGAGCAGCAAAGATGAAGAGCTATGTAATAAAGGGAAATTGAGGAAGAACAATAGCAAAAGCAGTAAAAGTGGTATGCAACTCCTACCATCTCGGTCAAGGAGAATCTTCGATAAGTTGTGGATTGTGGGGAAAGGACAGGGAGAGAATCGGAGCTCCGAGACTTCAGGGAGTTCTAACAGCCCAACTTCTGTAGTCCCTGTAGATACCAAATCATCCGGTTCTTCCTCAAGACACAGGAGGCATTCTGTCTCATAG 1800 0.4278 MKFMKLGSKPNALQADGKSIIRYVSTDLATDVIINVGEVKFYLHKFPLLSKSNQLQKLVSKADEENSDEIYIADFPGGPKAFEICAKFCYGITVTLNAYNVVAARCAAEYLEMTEDIDKGNLIFKIEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKIIGRCTDSIASKTSVNPEHITWSYTYNRKLSEDDKITEDQMICQEKIESVPKDWWVEDVCELDIDLYKRVMIAVKSKGRMDGVIIGEALEVYAVRWLPESVEALVSDAHAQRNRLVETIVCLLPFDYGGGCSCSFLLKLLKVAILVGAHESSREELMKNISFRLHEASVKDLLIPARSPQTTIYDVQLVQCLLNRCMTSERESHDMELDECTDKGKSLLNIGKLVDGYLAEIARDPSLNMSSFIELLQSIPEFARPKHDGLYRAIDIYLKEHPSLTKAERKKICGLMDVKKLTVDASMHAAQNERLPLRVVVQVLFHEQLRASTKVQALSSNQCDEDCEKTLGENCQSFKDQRSHLSSKDEELCNKGKLRKNNSKSSKSGMQLLPSRSRRIFDKLWIVGKGQGENRSSETSGSSNSPTSVVPVDTKSSGSSSRHRRHSVS 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1099 599 Gene3D Potassium Channel Kv1.1; Chain A 12 120 IPR011333 -
Prci2g1099 599 MobiDBLite consensus disorder prediction 562 587 - -
Prci2g1099 599 MobiDBLite consensus disorder prediction 516 543 - -
Prci2g1099 599 CDD BTB_POZ_NPY3-like 22 125 - -
Prci2g1099 599 ProSiteProfiles BTB domain profile. 30 98 IPR000210 GO:0005515
Prci2g1099 599 PANTHER OS12G0117600 PROTEIN 24 563 IPR043454 -
Prci2g1099 599 MobiDBLite consensus disorder prediction 560 599 - -
Prci2g1099 599 SUPERFAMILY POZ domain 22 116 IPR011333 -
Prci2g1099 599 SMART BTB_4 30 128 IPR000210 GO:0005515
Prci2g1099 599 ProSiteProfiles NPH3 domain profile. 212 480 IPR027356 -
Prci2g1099 599 FunFam BTB/POZ domain-containing protein NPY2 18 122 - -
Prci2g1099 599 Pfam BTB/POZ domain 29 118 IPR000210 GO:0005515
Prci2g1099 599 Pfam NPH3 family 212 456 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1099 Prci-Chr2 8142279 8146875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1099 23 485 EF-hand Containing Proteins AT3G44820 34.269 1.07e-92 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1099 - - gmx:100809437 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1099 2 8142279 8146875 Prci8g0046 8 311004 314641 CCT
Prci2g1099 2 8142279 8146875 Prci2g1099 2 8142279 8146875 ECH