Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2447 ATGGCGGCCGCTTTTCTCTTCACTGTTGCTCTGCTATCGGTGGCAACCGTGGCTCTTGGATTTCCGGCGTCTCTGACACTGGAGAGGGCGTTTCCGTCCAATCACGGAGTGGAGTTGAGTCAGCTGAGAGCTCGGGACAGCCTCCGGCATCGGAGAATGTTGCAGTCTTCAAACGGTGTGGTCGATTTCCAAGTTTTAGGCACTTTTGATCCCTTCCAAGTCGGGCTTTACTATACCAAAGTGCAGTTAGGCTCTCCTCCAACAGAATTCCACGTGCAGATTGACACTGGCAGTGATGTTCTCTGGGTTGGTTGCCGCTCCTGCAATGGCTGTCCCCAGACAAGTGGACTCCAAATTCAACTCAATTTTTTTGACCCTGGGAGTTCATCAACATCTTCACTGATCTCTTGTTCTGACCAAAGATGCAGAACTGGAGTTCAATCATCCGATGCCAGCTGTTCCAGCCAGAACAACCAGTGTGCTTACACATTCCAATACGGAGATGGCAGTGGGACATCGGGCTATTATGTGTCTGACTTGATGCATTTTGCTACCATTTTTGAGGGATCTGTGACTTCAAATTCTTCAGCCCCTGTAGTTTTTGGATGTAGCATCCAGCAGGCTGGTGACTTGACGAAGTCTGATAGAGCTGTTGATGGGATATTCGGGTTTGGACAGCAGGAGATGTCTGTCATTTCCCAGCTCGCCTCACAAGGCGTGGCGCCAAGAGTGTTCTCCCACTGTCTGAAAGGAGATAACACTGGTGGGGGCATTTTGGTTCTTGGTGAGATTGTCGAGCCAAATATAGTTTATACCCCACTAGTTCCATCGCAGCCTCATTACAATTTAAATCTGCAGAGCATCTCTGTCAATGGCCAAGTATTATCAATTGATTCATCTGTTTTTGCAACATCAAGCAACCGAGGTACCATTATTGATTCTGGAACGACATTGGCATACCTTGCAGAAGAGGCTTATGATCCCTTTGTCAGTGCGGTTACAGCTACAGTTCCACAATCCATACGAACTGTTCTTTCCCGGGGAAACCAATGCTACTTAATCACCGCCAGCATCTCTGATATTTTTCCTCTGGTAAGTCTGAACTTTGCTGGTGGCGCGTCTATGGTTTTAAGGCCACAGGACTACCTCATACAGCAGACTTCAATTGGTGGTGCAGCAATGTGGTGTATTGGCTTTCAAAAAATCCAGGGTCAAGGGATAACAATATTGGGAGATCTTGTGTTAAAAGACAAAATTTTAGTTTATGATCTGGGTGGTCAACGCATTGGATGGGCTAACTATGATTGTTCTCTGTCGGTTAATGTCTCAGCATCAACTGGCACGGGCAGAAGTGAGTATGTGAATGCAGGAGAGCTCAGTGGCAGCACTTCTTTACGTGACGGGATAAAGGCGGGAATCTTGGCTTTCATGATGCACATAACACTGATAAGCTGCATTGTATTTTTGTAG 1470 0.4694 MAAAFLFTVALLSVATVALGFPASLTLERAFPSNHGVELSQLRARDSLRHRRMLQSSNGVVDFQVLGTFDPFQVGLYYTKVQLGSPPTEFHVQIDTGSDVLWVGCRSCNGCPQTSGLQIQLNFFDPGSSSTSSLISCSDQRCRTGVQSSDASCSSQNNQCAYTFQYGDGSGTSGYYVSDLMHFATIFEGSVTSNSSAPVVFGCSIQQAGDLTKSDRAVDGIFGFGQQEMSVISQLASQGVAPRVFSHCLKGDNTGGGILVLGEIVEPNIVYTPLVPSQPHYNLNLQSISVNGQVLSIDSSVFATSSNRGTIIDSGTTLAYLAEEAYDPFVSAVTATVPQSIRTVLSRGNQCYLITASISDIFPLVSLNFAGGASMVLRPQDYLIQQTSIGGAAMWCIGFQKIQGQGITILGDLVLKDKILVYDLGGQRIGWANYDCSLSVNVSASTGTGRSEYVNAGELSGSTSLRDGIKAGILAFMMHITLISCIVFL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2447 489 Gene3D Acid Proteases 264 443 IPR021109 -
Prci7g2447 489 FunFam Aspartic proteinase-like protein 2 60 263 - -
Prci7g2447 489 FunFam Aspartic proteinase-like protein 2 264 443 - -
Prci7g2447 489 Gene3D Acid Proteases 61 263 IPR021109 -
Prci7g2447 489 CDD pepsin_A_like_plant 77 436 IPR034161 -
Prci7g2447 489 PRINTS Pepsin (A1) aspartic protease family signature 83 103 IPR001461 GO:0004190|GO:0006508
Prci7g2447 489 PRINTS Pepsin (A1) aspartic protease family signature 408 423 IPR001461 GO:0004190|GO:0006508
Prci7g2447 489 PRINTS Pepsin (A1) aspartic protease family signature 310 321 IPR001461 GO:0004190|GO:0006508
Prci7g2447 489 PANTHER ASPARTYL PROTEASES 21 430 IPR001461 GO:0004190|GO:0006508
Prci7g2447 489 Pfam Xylanase inhibitor C-terminal 280 432 IPR032799 -
Prci7g2447 489 SUPERFAMILY Acid proteases 72 439 IPR021109 -
Prci7g2447 489 Pfam Xylanase inhibitor N-terminal 77 262 IPR032861 -
Prci7g2447 489 ProSiteProfiles Peptidase family A1 domain profile. 77 432 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2447 Prci-Chr7 37112183 37117059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2447 51 437 Miscellaneous Gene Families AT1G44130 26.119 3.40e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2447 - - gmx:100791299 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2447 7 37112183 37117059 Prci6g0539 6 3447648 3450460 CCT
Prci7g2447 7 37112183 37117059 Prci7g2447 7 37112183 37117059 ECH