LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci7g2356	ATGACCGAGGTCCTCCATTCCTCATCCCATTTCTCTTCCACCTCAACGAGAAGCTCTTCCTCTTCGTCTTCCCTGTCGCGTGCGCCCCTGTCTTCATTGTCTTGCGCAACCCCTCCCGGCGATGGCATTTTCATTATTGGTGACCAAGAACCTCCGTCGCCGTCTTCGCTAGCCGTGGAGGGTTGTTCAACGGCGACGGGCTGTGACACGGAGGAGCTGGAGGAGAGGGACAAGCGCCGGACGGAACAGCTTTCTGTTTTGACGCTTGTTGTGGCCCTTTTCAGGAAATCCTTGCTTGCCTGTAAGAGTGGGAGGAGGGAGCTGTGCGCGATGGAGATCGGACGGCCTTCCAATGTGCGACATGTTGCACATGTCACGTTCGATAGATTCAATGGTTTCTTGGGTTTGCCTGTCGAGTTCGAACCTGAAGTGTCCAGAAGGCCTCCTAGTGCCAGTGCAACTGTTTTTGGAGTTTCGACGGAGTCCATGCAGTTATCGTATGACTCAAGAGGGAACATTGTGCCAACAATTCTGTTACGAATGCAGAAGCGTTTATATGCTCAAGGAGGGTTGCAGGCAGAAGGGATTTTCAGAATCAATGCAGAAAATAGTCAAGAGGAATATGTTAGGGACCAATTAAATAGTGGAGCGATGCCACAGGGCATTGATGTACATTGTTTGGCAGGGCTCATCAAGGCTTGGTTTCGGGAGCTGCCCAGAGGCATTCTGGATTCTTTATCCCCCGAACGGGTGATGCAATGCCAGATTGAGGAGGAATGTGCTGAACTAGTGAGGCATCTACCTCCTACTGAAGCTGCCCTCTTGGACTGGGCCATCAATCTGATGGCTGATGTTGTACTACACGAACATATCAACAAGATGAATGCACGCAATATTGCCATGGTTTTTGCGCCAAACATGACTCAGATGGCAGATCCTTTAACTGCATTAATGTACGCAGTCCAAGTGATGAATTTCTTAAAGACACTTGTAATAAGGACCCTCCGAGAAAGAAAGAATTTGTCGGTAGATTCTTCTCCTCAATTTCATTTTGAGCCTTCCGATGAGAATGGACACCATAGCCCTTTGCAGTCCTGCCAGCAAGATGCTAATGAAGAAAGTGAAGATGCACAGGAAAACTTCATTTTTAGAACTGTCCAAGAATGTTCCCCCAACTCTCCTCACCAAAGCATTAACTTAACTGGAGAAGAATCTGGCAGTTTGTTAGCCTCTTCTGAGCATCTAGTTTGTGATGGAGGTTTACGTTGTAAGTTTTCTCCCAAAGGAAATGCTGGAAAGAGCAAGACCGACCGACCAAGTTATCCAAATACTAGGAGGAAGCCCAAAAAGGCCACGGTCCAACAACCTACGATTCATGGAAAGGTGCCTGTTGAGAGGAGGGGGATTAGGAATCTGAGTCGGTTGGATTCAAGATCGGAGAGGATAGAAGCCTGGAGGTGA	1461	0.4839	MTEVLHSSSHFSSTSTRSSSSSSSLSRAPLSSLSCATPPGDGIFIIGDQEPPSPSSLAVEGCSTATGCDTEELEERDKRRTEQLSVLTLVVALFRKSLLACKSGRRELCAMEIGRPSNVRHVAHVTFDRFNGFLGLPVEFEPEVSRRPPSASATVFGVSTESMQLSYDSRGNIVPTILLRMQKRLYAQGGLQAEGIFRINAENSQEEYVRDQLNSGAMPQGIDVHCLAGLIKAWFRELPRGILDSLSPERVMQCQIEEECAELVRHLPPTEAALLDWAINLMADVVLHEHINKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLVIRTLRERKNLSVDSSPQFHFEPSDENGHHSPLQSCQQDANEESEDAQENFIFRTVQECSPNSPHQSINLTGEESGSLLASSEHLVCDGGLRCKFSPKGNAGKSKTDRPSYPNTRRKPKKATVQQPTIHGKVPVERRGIRNLSRLDSRSERIEAWR	486

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci7g2356	486	Pfam	P21-Rho-binding domain	112	139	IPR000095	-
	Prci7g2356	486	Gene3D	Rho GTPase activation protein	143	341	IPR008936	-
	Prci7g2356	486	MobiDBLite	consensus disorder prediction	426	486	-	-
	Prci7g2356	486	SMART	RhoGAP_3	172	335	IPR000198	GO:0007165
	Prci7g2356	486	MobiDBLite	consensus disorder prediction	343	371	-	-
	Prci7g2356	486	MobiDBLite	consensus disorder prediction	1	34	-	-
	Prci7g2356	486	SUPERFAMILY	GTPase activation domain, GAP	153	331	IPR008936	-
	Prci7g2356	486	SMART	PBD_5	113	147	IPR000095	-
	Prci7g2356	486	ProSiteProfiles	Rho GTPase-activating proteins domain profile.	158	339	IPR000198	GO:0007165
	Prci7g2356	486	MobiDBLite	consensus disorder prediction	463	486	-	-
	Prci7g2356	486	Pfam	RhoGAP domain	175	309	IPR000198	GO:0007165
	Prci7g2356	486	CDD	CRIB	111	151	-	-
	Prci7g2356	486	MobiDBLite	consensus disorder prediction	1	33	-	-
	Prci7g2356	486	Gene3D	CRIB domain	110	142	IPR036936	-
	Prci7g2356	486	CDD	RhoGAP	175	330	-	-
	Prci7g2356	486	PANTHER	MKIAA1688 PROTEIN	1	383	IPR044785	GO:0005096
	Prci7g2356	486	ProSiteProfiles	CRIB domain profile.	113	126	IPR000095	-
	Prci7g2356	486	FunFam	Rho GTPase-activating protein 5	143	336	-	-
	Prci7g2356	486	MobiDBLite	consensus disorder prediction	343	377	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci7g2356	Prci-Chr7	36545294	36549263	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci7g2356	-		K20642	gmx:100784019	560.451

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Prci7g2356	7	36545294	36549263	Prci6g0619	6	4093554	4098196	CCT