Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0619 ATGGGAGGGATGGAAATCGGATGGCCGTCTAACGTGCGCCATGTTGCGCACGTCACATTTGATAGGTTCAATGGTTTCTTGGGTTTGCCAGACGAATTCGAACCTGAAGTGCCCAGAAGGCCTCCCAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACCGAATCCATGCAGTTATCGTTTGACTCCAGAGGGAACAGTGTGCCAACAATTCTGTTATTAATGCAAAGACGCCTGTATAGTGAAGGAGGGTTGCAGGCAGAGGGCATATTCAGAATTAATGCAGAAAATAGTCAAGAGGAATATGTTAGGGAGCAATTAAATAGGGGAGTGGTCCCTGAAGGCATTGATGTACATTGCTTAGCAGGACTTATCAAGGCTTGGTTTAGGGAACTGCCAATAGGCGTTCTGGATTCCTTATCACCTGAGCAGGTAATGCAAAGCCAAACTGAAGAGGAGTGTGCTGAACTGGCAAGGAATCTACCTCCCACTGAAGCTGCCCTCTTGGACTGGGCAATCAATCTGATGGCTGACGTTGTCCAACATGAACATCTGAATAAGATGAATGCACGCAACATTGCAATGGTTTTTGCCCCTAACATGACTCAGATGGCAGACCCTTTGACTGCATTGATGTATGCAGTTCAAGTGATGAACTTCTTGAAGACACTGATACTCAGGACGCTGCGAGAAAGAAAAGATTCTATAGTAGAATCTTCACCTGTTTTTTACTTAGAGCCCTCTGATGATAATAGTTACCATGGCCCCATACAGTTCTGCCAGCAAGATTCTGCCAAAGATAATGAAGAGGCTCAGGCCTTCACAATTGAAAAAACTGTCTCCGAACGTAACCCTGCCCCTGATTCCCTCCAAGAGACTAACTTAACATCTGGAGGAGAATCTGGCAGTTTGGTAACCTCTTCTGAAAACCCAGCATGTCATGAGGATTTGTATTGTGAGTATCCACCAAAAGGAAATGTTGTGAAGAGTAAAACAGGCCAATCCAACAATTCAAATTCAAGAAAGGGGTCGAAGAAAACCAGAGACCAGCAACCTACGAACCAAAGAACAACGACTGTTGAGAAAACTAAGGGAACTGGTAAACTGAGTCGCATAAATTCAAGATCTGATAAGGCAGAACCATGGCGGTGA 1149 0.4482 MGGMEIGWPSNVRHVAHVTFDRFNGFLGLPDEFEPEVPRRPPSASATVFGVSTESMQLSFDSRGNSVPTILLLMQRRLYSEGGLQAEGIFRINAENSQEEYVREQLNRGVVPEGIDVHCLAGLIKAWFRELPIGVLDSLSPEQVMQSQTEEECAELARNLPPTEAALLDWAINLMADVVQHEHLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLILRTLRERKDSIVESSPVFYLEPSDDNSYHGPIQFCQQDSAKDNEEAQAFTIEKTVSERNPAPDSLQETNLTSGGESGSLVTSSENPACHEDLYCEYPPKGNVVKSKTGQSNNSNSRKGSKKTRDQQPTNQRTTTVEKTKGTGKLSRINSRSDKAEPWR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0619 382 Gene3D CRIB domain 3 35 IPR036936 -
Prci6g0619 382 CDD CRIB 4 44 - -
Prci6g0619 382 MobiDBLite consensus disorder prediction 349 369 - -
Prci6g0619 382 Pfam RhoGAP domain 68 202 IPR000198 GO:0007165
Prci6g0619 382 CDD RhoGAP 68 224 - -
Prci6g0619 382 PANTHER MKIAA1688 PROTEIN 3 349 IPR044785 GO:0005096
Prci6g0619 382 SMART RhoGAP_3 65 228 IPR000198 GO:0007165
Prci6g0619 382 ProSiteProfiles Rho GTPase-activating proteins domain profile. 51 236 IPR000198 GO:0007165
Prci6g0619 382 FunFam Rho GTPase-activating protein 5 36 229 - -
Prci6g0619 382 ProSiteProfiles CRIB domain profile. 6 19 IPR000095 -
Prci6g0619 382 SUPERFAMILY GTPase activation domain, GAP 46 225 IPR008936 -
Prci6g0619 382 MobiDBLite consensus disorder prediction 278 308 - -
Prci6g0619 382 Pfam P21-Rho-binding domain 5 32 IPR000095 -
Prci6g0619 382 MobiDBLite consensus disorder prediction 323 382 - -
Prci6g0619 382 Gene3D Rho GTPase activation protein 39 236 IPR008936 -
Prci6g0619 382 SMART PBD_5 6 40 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0619 Prci-Chr6 4093554 4098196 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0619 - K20642 gmx:100775644 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2356 7 36545294 36549263 Prci6g0619 6 4093554 4098196 CCT
Prci6g0619 6 4093554 4098196 Prci6g0619 6 4093554 4098196 ECH