Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2268 ATGGGTTCCGTGAACGACGATGTTCGTCAGCCGTTGTTGCCGCGTAGCGACCTTCCGACTTCGTCGGATCAATCTTTCACGTCCAAGCACCACTCTAATGCCGACCTCGAAAGAATCCTCTCCGATTCCACCGTCCCTTTCCGGCGCCGTCTCGGTCCCGCCACTTGGATCGAGTTCAAGCTCCTCTTCTACCTGGCCGCTCCGGCCGTCGTCGTCTATTTGATCAACTACGTCATGTCCATGTCCACCCAAATCTTTTCCGGCCACCTCGGCAACCTCGAGCTCGCCGCTGCTTCCCTTGGCAACACCGGCATCCAAATCTTTGCATATGGCCTCATGCTGGGCATGGGAAGCGCCGTGGAGACGCTGTGCGGACAAGCTTACGGTGCCGGTAAGTACGAAATGTTAGGAGTTTACTTGCAGAGATCGACAATCCTGCTCACGTTAACAGGAATACTGTTGACCGTCGTGTACGTCTTCTCCGAACCCATTCTGATATTACTGGGAGAATCGCGGAGGATTGCTTCCGCTGCTGCAGTCTTCGTGTATGGCCTGATCCCTCAAATCTTCGCTTACGCTGTGAACTTCCCCATACAGAAATTCCTTCAAGCTCAGAGCATAGTGGCACCGAGCGCGTACATATCAGGAGGCACCCTTGTGATTCACCTGGTGTTGAGCTGGGTTCTTGTGTACAAGGCTGGGCTGGGATTGTTGGGGGCGTCGTTGACGTTGAGTTTGTCGTGGTGGATTATTGTGATAGCACAGTTTGTGTATATTGTGAAGAGCGAAAGGTGTAAGTACACGTGGCAAGGGTTCACGACGCAAGCATTTTCGGGGTTGCCGGAGTTCTTCAAGTTATCGGCGGCGTCCGCGGTGATGTTATGCCTGGAGACCTGGTACTTCCAGATTCTGGTTTTGCTGGCGGGTTTGCTCCCTGATCCTGAAATTGCCCTCGATTCCCTCTCCATCTGCACCACAATATCCGGATGGGTGTTCATGATATCTGTTGGATTCAACGCAGCTGCAAGTGTGAGAGTGAGCAACGAGCTGGGAGCAAGACATCCAAAATCAGCAGCATTCTCTGTGGTGGTGGTGACGATCCTATCGTTCATCATATCTGTTATTGTGGCGGTGGCCGTGCTCATTTTACGCGACGTGATCAGCTATGCCTTCACAGAAGGTGAAATCGTTGCCGCTGCTGTCTCTGATCTTTGCCCTCTCCTCGCACTTTCTATCGTCATCAACGGCATTCAGCCTGTTCTGTCAGGTGTGGCTGTTGGTTGTGGATGGCAAGCTTTTGTTGCATATGTAAACGTGGGCAGTTATTATGGAGTTGGCATACCATTAGGTTGCATCATGGGTTTTGTCTTCAAGCTCGGTGCCAGGGGAATATGGGTGGGAATGCTGGGTGGCACGATCATCCAAACAATCATTTTGCTTTGGATCACACTTAAGACGGACTGGAATAAAGAGGTTGAGGAAGCGGTGAAGAGGTTGAACAAGTGGGAGGGCAAGGAGGGACCACTTCAAAAGAATTGA 1539 0.5179 MGSVNDDVRQPLLPRSDLPTSSDQSFTSKHHSNADLERILSDSTVPFRRRLGPATWIEFKLLFYLAAPAVVVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQIFAYGLMLGMGSAVETLCGQAYGAGKYEMLGVYLQRSTILLTLTGILLTVVYVFSEPILILLGESRRIASAAAVFVYGLIPQIFAYAVNFPIQKFLQAQSIVAPSAYISGGTLVIHLVLSWVLVYKAGLGLLGASLTLSLSWWIIVIAQFVYIVKSERCKYTWQGFTTQAFSGLPEFFKLSAASAVMLCLETWYFQILVLLAGLLPDPEIALDSLSICTTISGWVFMISVGFNAAASVRVSNELGARHPKSAAFSVVVVTILSFIISVIVAVAVLILRDVISYAFTEGEIVAAAVSDLCPLLALSIVINGIQPVLSGVAVGCGWQAFVAYVNVGSYYGVGIPLGCIMGFVFKLGARGIWVGMLGGTIIQTIILLWITLKTDWNKEVEEAVKRLNKWEGKEGPLQKN 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2268 512 CDD MATE_eukaryotic 58 494 IPR045069 GO:0042910|GO:1990961
Prci7g2268 512 Coils Coil 485 505 - -
Prci7g2268 512 MobiDBLite consensus disorder prediction 15 29 - -
Prci7g2268 512 Pfam MatE 68 228 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci7g2268 512 Pfam MatE 290 451 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci7g2268 512 NCBIfam MATE family efflux transporter 68 465 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci7g2268 512 PANTHER MULTIDRUG RESISTANCE PROTEIN 54 488 - -
Prci7g2268 512 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2268 Prci-Chr7 35934703 35939062 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2268 K03327 - gmx:100801718 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2268 7 35934703 35939062 Prci6g0741 6 4947310 4951479 CCT
Prci7g2268 7 35934703 35939062 Prci7g2268 7 35934703 35939062 ECH