Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0741 ATGGCTTCTCTGCAAAACGACGCTCATCAGCCATTGTTGCCTCCGAGGGATCCACAGCCACCTTCCTTGACTCCCCCCCTCAGCTACGATCACGATTCATCAAACGGCGAGCTCGAGATCATACTCTCCGACACCACCCTACCTCTATTCACGTGCTTTCGGGCCGCCACATCGATCGAGCTGAAGCTGCTATTCTTCCTTGGGGCCCCCGCCGTCATCGTGTATTTGATCAACTACGTCATGTCCATGTCCACCCAGATATTCTCGGGCCACCTCGGCAACCTCGAGCTCGCCGCCGCTTCCCTCGGCAACACTGGCATCCAAGTCTTTGCCTATGGCCTCCTGTTGGGCATGGGGAGTGCGGTGGAGACGCTGTGCGGGCAAGCATTTGGTGCGAACAAGTACGAAATGCTGGGAGTATACTTGCAGAGATCAACGATTCTGCTAACACTGACGGGGATTCTTCTGACCATCCTGTACGTATTCTCGGAACCTATTTTAATATTTCTGGGAGAATCTCCAAGAATTGCATCCGCAGCTGCACTGTTCGTGTACGGTCTGATTCCTCAAACCTTCGCGTATGCCGTCAACTTCCCAATCCAGAAGTTTCTGCAAGCTCAGAGCATAGTGGCCCCGAGTGCGTATATATCTCTGGGGACGCTGGTGATTCATCTGGTGTTAAGCTGGGTGTTCGTGTACGAGATCGGGCTTGGATTACTGGGAGCGTCGTTGGTTCTAAGCTTGTCGTGGTGGATCCTGGTGATAGGTCAGTTTGCGTATATTGTGAAGAGTGACAAGTGTAAGAAGACATGGCAGGGCTTCACGGTGCAGGCGTTCTCGGGGCTGCCGGAGTTCTTCAAGCTATCCGCGGCTTCGGCTGTCATGTTGAGTTTGGAGACGTGGTACTTTCAGATTCTGGTTCTGCTCGCTGGTTTGCTGGATCACCCTGAATTGGCTCTTGATTCTCTTTCCATTTGTACCACTATATCCGGATGGGTGTTCATGATCTCAGTAGGATTCAACGCAGCCGCAAGTGTAAGAGTAAGCAATGAGCTAGGAGCCAGAAATCCAAAATCAGCAGCGTTCTCGGTGGTGGTGGTGACGTCGATATCTTTCATGATAGCTGTGATCGCAGCAATCACAGTGCTCGCTTTAAGGGATGTGATTAGTTATGCCTTCACAGATGGTGAGTTCGTCGCTGCTGCTGTTTCTGATCTCTGTCCTCTCCTGGCTCTTGCCATCGTCCTCAACGGCATTCAGCCCGTCTTATCTGGGGTGGCTGTTGGGTGTGGATGGCAGAGTTTTGTTGCGTATGTGAACGCAGGCTGTTATTATGGAATTGGCATTCCCCTGGGCTCACTCCTCGGCTTCTACTTTAAACTTGGTGCTAAGGGAATATGGTCGGGAATGCTCGGTGGAATGCTCATGCAAACAATTATTTTGATGTGGGTTACGCTTCGAACGGATTGGTATAAAGAGGTTGAAGAAGCAGGCAAGAGGTTGAACAAGTGGGAAGACAAGAAGGAGTCATCACCTCTTGAGAAGTGA 1548 0.5123 MASLQNDAHQPLLPPRDPQPPSLTPPLSYDHDSSNGELEIILSDTTLPLFTCFRAATSIELKLLFFLGAPAVIVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQVFAYGLLLGMGSAVETLCGQAFGANKYEMLGVYLQRSTILLTLTGILLTILYVFSEPILIFLGESPRIASAAALFVYGLIPQTFAYAVNFPIQKFLQAQSIVAPSAYISLGTLVIHLVLSWVFVYEIGLGLLGASLVLSLSWWILVIGQFAYIVKSDKCKKTWQGFTVQAFSGLPEFFKLSAASAVMLSLETWYFQILVLLAGLLDHPELALDSLSICTTISGWVFMISVGFNAAASVRVSNELGARNPKSAAFSVVVVTSISFMIAVIAAITVLALRDVISYAFTDGEFVAAAVSDLCPLLALAIVLNGIQPVLSGVAVGCGWQSFVAYVNAGCYYGIGIPLGSLLGFYFKLGAKGIWSGMLGGMLMQTIILMWVTLRTDWYKEVEEAGKRLNKWEDKKESSPLEK 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0741 515 CDD MATE_eukaryotic 60 496 IPR045069 GO:0042910|GO:1990961
Prci6g0741 515 PANTHER MULTIDRUG RESISTANCE PROTEIN 55 490 - -
Prci6g0741 515 MobiDBLite consensus disorder prediction 1 29 - -
Prci6g0741 515 Pfam MatE 70 230 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci6g0741 515 Pfam MatE 292 452 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci6g0741 515 NCBIfam MATE family efflux transporter 70 467 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0741 Prci-Chr6 4947310 4951479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0741 K03327 - gmx:100801718 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2268 7 35934703 35939062 Prci6g0741 6 4947310 4951479 CCT
Prci6g0741 6 4947310 4951479 Prci6g0741 6 4947310 4951479 ECH