Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2153 ATGGAACCAGTTCTAAGTCATGACAATAGCAGCGGCAGCCATGGCAGCAATAGCAACGATGGACACGACATCATTGGGTGGTTTGAAGATGTAACAGAGAAGGCAGGTTCTGTTCAGACCCAGATCTTATCACAGATTCTGAAGCAGAACCATGGGGTGGAATATCTCGACAAATGGTTGGGTCGCTTCAATATCCTCGACATGGATGCTTGTGCATTGGAATCTCTTTTCACTTCTGTGGTTCCCCTCGCCTCTCATGAAGATTTTGAGCCTTTTATCCAAAGGATTGCAGATGGGGACACGACTCCCTTGCTCACTCGACAACCCATTACCACTCTTTCCTTGAGTTCCGGAACCACAGAGGGAAAGCAAAAGCTCGTACCTTTCACCCGGCACAGCGCCCAAACTACCCTTCAAGTCTTCACTTTATCAGCAGCCTACAGATCAAGGGTTTATCCTATAAGAGAAGGAGGTAGGATTCTTGAATTCATATACAGCAGCAATCAGTTTCAAACCAAAGGAGGCTTAAGGGTAGGAACGGCCACAACACACTACTATGCAAGCCAAGAGTTCAAGATCAAACAGGAGAAAACGAAGTCATTCACTTGCAGCCCTGACGAGGTGATTTCAGGAGGAGACTACAGGCAAGCCACATATTGCCACCTCCTCCTCGGCCTCTACTTCTCCGATCAAGTAGAGTTTATCACTTCAGCCTTCGTCTTTAGCATAGTGCAAGCTTTTCGCAGTTTCGAAGAACTTTGGAGGGATATCTGCAACGACATTAAAGAAGGAAGTCTAAACTCGAGAATCAATGTACCCAAAATGAGGAAGGCTGTTTTGAATCTTATTTCCCCAAACTCATCCCTAGCTTTAAGAGTAGGAGCTGCCTGCTTGGAATTGGAAGAGGTGAATTGGTCTGGTCTGATTCCCAAACTTTGGCCAAATGTTAAGTATGTATATTCCATAATGACGGGGTCGATGCAACCATACCTGAGAAAACTAAGACATTATGCAGATGAGTTGCCATTAGTAACGGCTGACTATGGCTCTACAGAGAGCTGGATAGGAGTTAATGCGGATCCTAGTTTGCCTCCAGAGAATGTAACATACGCTGTCGTGCCTACTTTCTCTTACTTCGAGTTCATACCCCTTCATAGACAGAAGCAAGGTTGCACTTCATTTGCGGATGATTTCATGGAGGATTTGCCTATTCCACTATCCCAAGTTAAGGCTGGGCAAGAGTATGAAATAGTGCTCACAACTTTCACCGGGCTGTATAGGTGCAGGCTAGGAGACGTGGTGGAAGTCGGGGGTTTTCACAGAGGGACTCCAAAGTTGAATTTCATATGCAGAAGAAAGCTAATCCTGACAATAAACATAGACAAGAACACAGAGAAGGACCTTCAGCGAGTGGTGGAAAGAGGCTCGGAACTGCTGAACAAGGAGGAAGCGGAGGTGGTGGACTTCACCAGCTACGCGGACGTGTCGAAACCACCCGGACACTATGTGATCTACTGGGAGATCAAAGGGAAGGTGGATGATGAGTTGCTGCACAAGTGTTGTACACAAATGGATGTGTCCTTTGTCGACCATGGCTATGTGGTGTCCAGAAAGACCCACTCCATCGGGCCCCTTGAGCTTCGCTTGGTCAAGCCAGGCACCTTCAAAAGGATTCTCGACCACTTCGTCGCGAGCGGGGCTGCCCTCGGCCAGTTCAAGACCCCTCGGTGCACCTCCAACCCTGGCCTCCTCACCATCCTCTCTGCCTCCACCATTAGGACCTTTCGCAGCACCGCCTATGCTTAG 1806 0.4801 MEPVLSHDNSSGSHGSNSNDGHDIIGWFEDVTEKAGSVQTQILSQILKQNHGVEYLDKWLGRFNILDMDACALESLFTSVVPLASHEDFEPFIQRIADGDTTPLLTRQPITTLSLSSGTTEGKQKLVPFTRHSAQTTLQVFTLSAAYRSRVYPIREGGRILEFIYSSNQFQTKGGLRVGTATTHYYASQEFKIKQEKTKSFTCSPDEVISGGDYRQATYCHLLLGLYFSDQVEFITSAFVFSIVQAFRSFEELWRDICNDIKEGSLNSRINVPKMRKAVLNLISPNSSLALRVGAACLELEEVNWSGLIPKLWPNVKYVYSIMTGSMQPYLRKLRHYADELPLVTADYGSTESWIGVNADPSLPPENVTYAVVPTFSYFEFIPLHRQKQGCTSFADDFMEDLPIPLSQVKAGQEYEIVLTTFTGLYRCRLGDVVEVGGFHRGTPKLNFICRRKLILTINIDKNTEKDLQRVVERGSELLNKEEAEVVDFTSYADVSKPPGHYVIYWEIKGKVDDELLHKCCTQMDVSFVDHGYVVSRKTHSIGPLELRLVKPGTFKRILDHFVASGAALGQFKTPRCTSNPGLLTILSASTIRTFRSTAYA 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2153 601 Pfam GH3 auxin-responsive promoter 27 580 IPR004993 -
Prci7g2153 601 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 22 600 IPR004993 -
Prci7g2153 601 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2153 Prci-Chr7 35316562 35320919 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2153 18 598 EF-hand Containing Proteins AT1G23160 34.899 1.08e-121 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2153 K14487 - gmx:100792358 946.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2153 7 35316562 35320919 Prci6g0840 6 5795154 5798205 CCT
Prci7g2153 7 35316562 35320919 Prci7g2153 7 35316562 35320919 ECH