Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0840 ATGGAGCTTCTGCGACATTTAGCTTTTCTTATTGCTGAGCCTTTCAAACGCAAGAAAAATTCCTTGATATTATGGATATACCCAGAGAGAGACCTTTCAACTAGGGGGCTCCCTTTGCTCGTCTCTGTTTCCCATCTTCAAATTACTCGGGCCCCCCATACACGAGCAGATAAATTTTACTCAGAGCTACACAGCTCCTTCTCGTTCTTCTTCTTCTTCGCCTTGATGCCTCAACACCGAGCATCGTCGTTGATGGAACCGCTTCTTCGTTGTAGCAATGGCGGAACCAGCCATGTCTGTGATATCATAAGCTGGTTTGAAGATGTAACCAACAACGCTGGTTCTGTTCAGACGCAGATGCTATCCAAGATTCTGAAGCAGAACTGTGGGGCTGAATACCTCAAGAAATGGCTCGGGGACTATAATGTTCAAGACATGGATGATTGTGCATTGGAATCGCTTTTCACTTCTGTGGTTCCTCTGGCATCGCATGCCGATTTTGAGCCCTTTATCCAGAGGATTGCGGATGGGGACACAGCCCCTTTACTCACTCAACAATCCATAACCACCCTTTCCTTGAGTTCTGGAACCACAGAGGGGAGGCAGAAGTTTGTACCTTTCACCCACCATAGCGCGCAGACTACCCTCCAAATATTCACTTTAGCAGCAGCTTATAGATCAAAAGTTTATCCCACAAGAGAAGGAGGGAGGATTTTAGAATTCATATATAGCAGCAAGCAGTTCAAAACAAAAGGAGGCTTAACGGCAGGAACGGCCACAACGCACTACTACAAGAGCCAAGAGTTCAAGATCAAGCAGGAGAAAACGAAGTCTTTTACTTGCAGTCCAGACGAAGTAATATCTGGAGGAGACTACAAACAAGTCACTTATTGCCACCTCCTCCTCGGCCTTTTTTACTCTGAACAAGTCGAGTTCATAACCTCGGCCTTTGTCTACAGCATAGTCCAAGCCTTTCGCAACTTCGAAGAGCTGTGGAGAGAAATATGTTGCGACCTCAGGAATGGTACTGTGAGTTCCAGAATTAAAGTACCCAGAGTGAGAAATTCTGTTCTGGGGATTCTCTCCGATCCAAACCCGTCTCTGGCTTCAAAAATAGAAGTCAAATGCCAGGAACTAGAAAAGGTGAACTGGTTTGGTTTAATTCCTAAGCTGTGGCCAAATGCCAAGTATGTGTATTCCATAATGACAGGGTCCATGGAGCCGTATTTGAAAAAGCTAAGGCATTATGCAAAGGGTTTGCCATTAGTGAGTGCTGATTATGGATCTACAGAGAGCTGGATTGGGGTTAATGTGGATCCGGGTTTGCCTCCAGAGAATGTGACATTTGCTGTAGTGCCCACTTTCTCTTACTTTGAATTCATACCACTCCACAGATCCCAGAAAGCACAAGAATGCAATTCGGCTGGTGATGATTTCGTGGAAGACAAGCCAATCCCATTGTCCCTGGTTCAAGTTGGACAGAAGTATGAAATAGTCCTCACAACTTTCACCGGGCTATACAGATGTCGATTAGGGGACGTGGTGGAAGTAGCAGGGTTTCACAACAGGACGCCGAAGCTGAACTTCATAAGCAGAAGGAAGCTAATTCTAACAGTGAACATAGACAAGAACACGGAGAAGGACCTCCAACTAGTGGTAGAGAGGGGCTCGCAGCTTCTGAGCACGGTCCAAAAGAAAGCCGAGCTAGTGGACTTCACGAGCTATGCTGACGTGTCGAACCAACCGGGACACTACGTTATATACTGGGAAGTCAAAGGTGAGGTGGAGGACGAGGTTCTTGAGGAATGTTGTAGGGAGATGGATGGAGCTTTTGCAGACCATGGGTATGTGGTGTCCAGGAAGACCAATTCCATTGGACCTCTCGAGCTTCGCTTGGTGGAGAGAGGAACCTTCAAGAAGATTCTAGATTACTTCGTCGCTAATGGGGCTGCTTTGAGCCAGTTCAAGACTCCTAGGTGCACTAATAATCAAGTGCTTCTCAAGATTCTTAACACTTGCACCGTGAAAAGTGTTCGTAGCTCTGCTTACTGTTCCCGGGAATGA 2064 0.4637 MELLRHLAFLIAEPFKRKKNSLILWIYPERDLSTRGLPLLVSVSHLQITRAPHTRADKFYSELHSSFSFFFFFALMPQHRASSLMEPLLRCSNGGTSHVCDIISWFEDVTNNAGSVQTQMLSKILKQNCGAEYLKKWLGDYNVQDMDDCALESLFTSVVPLASHADFEPFIQRIADGDTAPLLTQQSITTLSLSSGTTEGRQKFVPFTHHSAQTTLQIFTLAAAYRSKVYPTREGGRILEFIYSSKQFKTKGGLTAGTATTHYYKSQEFKIKQEKTKSFTCSPDEVISGGDYKQVTYCHLLLGLFYSEQVEFITSAFVYSIVQAFRNFEELWREICCDLRNGTVSSRIKVPRVRNSVLGILSDPNPSLASKIEVKCQELEKVNWFGLIPKLWPNAKYVYSIMTGSMEPYLKKLRHYAKGLPLVSADYGSTESWIGVNVDPGLPPENVTFAVVPTFSYFEFIPLHRSQKAQECNSAGDDFVEDKPIPLSLVQVGQKYEIVLTTFTGLYRCRLGDVVEVAGFHNRTPKLNFISRRKLILTVNIDKNTEKDLQLVVERGSQLLSTVQKKAELVDFTSYADVSNQPGHYVIYWEVKGEVEDEVLEECCREMDGAFADHGYVVSRKTNSIGPLELRLVERGTFKKILDYFVANGAALSQFKTPRCTNNQVLLKILNTCTVKSVRSSAYCSRE 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0840 687 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 102 683 IPR004993 -
Prci6g0840 687 Pfam GH3 auxin-responsive promoter 105 664 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0840 Prci-Chr6 5795154 5798205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0840 101 681 EF-hand Containing Proteins AT1G23160 35.630 1.96e-122 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0840 K14487 - gmx:100792358 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2153 7 35316562 35320919 Prci6g0840 6 5795154 5798205 CCT
Prci6g0840 6 5795154 5798205 Prci6g0840 6 5795154 5798205 ECH