Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2006 ATGATGAATGATGATCAGAAACCGCAGCAAGCAGGCGGCGTTCGGTCCGGTCGAACCAATGGGTTTTTTCCCAGCTCGCTCCGGGCTATCTCCAGCTACCTCAGGGTTGTTTCCTCCGGTGCTTCCAACGTTGCTCGGTCTGCTGCATCAGTTGCGTCCTCGATTGTTGATAGGGATGATGACGCCAATTCTGATCAGGTCATCTGGGCTGGATTTGATAAATTAGAGGGTGAGGGAGAAGTCACCCGTCAAGTTCTACTTCTAGGATTTCGGTCCGGCTTCCAGGTTTGGGATGTTGAAGATTCACATAATGTGCGTGACCTAGTTTCCAGGCATGATGGTCCTGTTTCTTTTATGCAAATGCTACCAAGTCCAATTGCATCAAAGAGATCAGCAGAAAAGTTTGCAAATAGCCGCCCGCTGTTAGCTGTCTGTGCTAATGGTTTCTTTGCTGGAGGCAGTAACATTCAGGATGGGCCGACCAAACCTTACAATGGGGGCACCTCCAATTTCCATGAGCAATTGAATGGAAATTATCTGCCAACGACTGTTCAGTTTTACTCCATGCGATCCCAGTCATATGTCCATGCACTGAAATTTCGATCAGTTGTTTATTCTGTAAGGTGCAGTTCTCGAGTAGTTGCTGTATCTCAATCAACTCAGATACACTGTTTTGATGCTGCAACATTAGAACGAGAGTATACTATACTTACCAATCCTATAGTTGTAAGTTGTCCTGGTTCTGGAGGGGTGGGCTATGGACCGCTTGCAGTGGGTTCAAGATGGCTGGCTTATAGTGGAAGTCCAGTCACAATATCTAGTTCTGGGCATGTCAATCCACAAGATTTGACAACTTCAGCGAGCTTTCCTGGTTTTTCTTCAAATGGGGGCTTGGTTGCACACTATGCCAGAGAATCAAGCAAGCAACTTGCTTCTGGGATTGTGTCCCTTGGAGATATGGGGTATAAGAAACTTTCCAGATACTACTCTGAGCTTCTGTCTGACAGCAACAGTTCTTCACGATCTGTAAATTCAGGTTGGAAGGGCAATGGAACCATTAATGGACATTCAGCAGACACCGACAACATTGGGATGGTCATTGTAAGGGATATTGTCAGTAAAAATGTAGTTACTCAACTGCGAGCCCACAAAAGCCCTATTTCAGCCTTATGCTTCGATCCCAGTGGGACCATTTTGGTGACTGCTTCAGTTCAGGGGCATAATATAAATGTATATAAGATAATGCCTTGTCACTCAGAGGCATCCGATGCTGGCCCTTCTAATGTTCATCTCTACAGGTTGCAACGTGGCTATACTAATGCAGTAATACAAGATATTAGTTTCAGTGATGACAGCTGTTGGATTATGATAAGTTCCTCTAGGGGCACTAGCCATATATTTGCTATAAATCCTCAGGGAGGATCTGTGAATATTCAAGCCCTTGATTGTAGTCTTCCAACACAAAATAACGGATTGGGTGGTATTACTAACCAAGCAGTCCTCAATCCTTATAGTTCAGCCTTGCAAATGCATAAAAAGCAGAGCCTGTGTGCAGCTGGCCCACCAATCACACTTTCTGTTGTTAGCAGAATTAGGAATGGAACTAATGGCTGGAGAGGCACTGTCAGCGGTGCTGCTGCAGCTGCCACAGGAAAGATGAGTTCCCTTTCTGGGGCTATTGCTTCATCTTTCTGTCACTGCAAGGGCATTGGCAGATATGTTGATGGGAAGCATTCCAAAACAAAGTATCACTTGTTGGTTTTTTCATCCTCTGGTTCCATGATACAATATGCTCTACAGATGTTAAATGGTCGAGATTCAGCTATTGTGTCTGGATTAAACCCTGCTTTTGAATTAGCTCCACAAGCTGATGCAAGATTAGTAGTGGAAGCTATTCAGAAATGGAATATATGTGAAAGACTAAGTTTACGGGAGCGAGAAGATAACATTGACATATATGGTGATAATGGAATTCCTGATGGCAACAAAATTTATCCTGAAGAATCGAAAAAGGACATTGTCAGTAACCCAAAATTCAACAATGAAGTTGTGAAAGCAAATTCCTCTTCAGAGGAAGATCGTCATCTGTATATTTCCCAAGCTGAACTGCAGATGCACCAAACTCACACTCCATTGTGGGCAAAGTCTGAGATATATTTTCATTCAATGGTGAAAGAAGCTACTATAATAGATGAAGGAGCTGCTGCGGGAGGGGAATTTGAGATTGAAAGGATTCCTACTCGCATTATTCAAGCGAGGTCCAAGCACTTAATTCCTGTTATACAGACCCCCAAACTCCAACAAACAAGGTTTGTAATTATTCTTTCATTTGGCCCCGGAAGCTCAATTAACAGTGTTAATATAAAATGGTTGGAGAGGTGA 2382 0.4353 MMNDDQKPQQAGGVRSGRTNGFFPSSLRAISSYLRVVSSGASNVARSAASVASSIVDRDDDANSDQVIWAGFDKLEGEGEVTRQVLLLGFRSGFQVWDVEDSHNVRDLVSRHDGPVSFMQMLPSPIASKRSAEKFANSRPLLAVCANGFFAGGSNIQDGPTKPYNGGTSNFHEQLNGNYLPTTVQFYSMRSQSYVHALKFRSVVYSVRCSSRVVAVSQSTQIHCFDAATLEREYTILTNPIVVSCPGSGGVGYGPLAVGSRWLAYSGSPVTISSSGHVNPQDLTTSASFPGFSSNGGLVAHYARESSKQLASGIVSLGDMGYKKLSRYYSELLSDSNSSSRSVNSGWKGNGTINGHSADTDNIGMVIVRDIVSKNVVTQLRAHKSPISALCFDPSGTILVTASVQGHNINVYKIMPCHSEASDAGPSNVHLYRLQRGYTNAVIQDISFSDDSCWIMISSSRGTSHIFAINPQGGSVNIQALDCSLPTQNNGLGGITNQAVLNPYSSALQMHKKQSLCAAGPPITLSVVSRIRNGTNGWRGTVSGAAAAATGKMSSLSGAIASSFCHCKGIGRYVDGKHSKTKYHLLVFSSSGSMIQYALQMLNGRDSAIVSGLNPAFELAPQADARLVVEAIQKWNICERLSLREREDNIDIYGDNGIPDGNKIYPEESKKDIVSNPKFNNEVVKANSSSEEDRHLYISQAELQMHQTHTPLWAKSEIYFHSMVKEATIIDEGAAAGGEFEIERIPTRIIQARSKHLIPVIQTPKLQQTRFVIILSFGPGSSINSVNIKWLER 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2006 793 Gene3D - 81 492 IPR015943 GO:0005515
Prci7g2006 793 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 16 767 IPR045142 GO:0006914
Prci7g2006 793 SUPERFAMILY WD40 repeat-like 84 470 IPR036322 GO:0005515
Prci7g2006 793 SMART WD40_4 373 413 IPR001680 GO:0005515
Prci7g2006 793 SMART WD40_4 191 226 IPR001680 GO:0005515
Prci7g2006 793 SMART WD40_4 427 468 IPR001680 GO:0005515
Prci7g2006 793 FunFam Breast carcinoma-amplified sequence 3 292 520 - -
Prci7g2006 793 Pfam Breast carcinoma amplified sequence 3 520 759 IPR022175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2006 Prci-Chr7 34338167 34344966 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2006 - - gmx:100784596 1055.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2006 7 34338167 34344966 Prci6g1037 6 7230438 7236947 CCT
Prci7g2006 7 34338167 34344966 Prci7g2006 7 34338167 34344966 ECH