Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1037 ATGAAGAAGGATGACCAGAAACTACATCAGGGAGGTCCAATGCCTCGCCCAGGGCGAACTAATGGATTAATTCCGAGCTCATTCCGTGCTCTCTCAAGCTACCTGAGGGTTGTTTCCTCTGGTGCTTCCACCGTTGCACGGTCAGCAGCATCCGTTGCGTCCTCGATTCTCGACAGGGATAGTGACGCTGACCATGATCAGGTTATCTGGGCTGGGTTTGACAAGTTAGAGGTGGAGGGAGATGTCATTCGGAAAGTTCTTCTTCTAGGCTATCGAACTGGGTTCCAGGTTTGGGACATTGAAGATTCCAAGAATGTGCAAGACCTAGTTTCCAGACATGATGGTCCTGTTTCTTTTATGCAAATGCTATCGAAACCAATTGCATCAAAGAGATCAGAAGATAAGTTTGCAGACAGATGGCCGCTGTTGGTTGTTTGTACTGATGGAATTTTTGCTGGAGGCAGTAACATTCAAGATGGTTTTGTCTCCTCTTGCAATGGAAGCACTTTAAACTGCCATGACCAAGTGAATGGCATTTATCTGCCAACTACTGTTCAGTTTTATTCTTTGAGATCCCAATCATATGTACATGTACTAAAGTTTAGGTCAGCTATTTATTCTGTTAGGTGTAGTTCTCGAGTTGTTGCTGTTGCTCAATCCACTCAGGTACATTGTTTCAATGCCACTACATTAGAAAGGGAATATACTCTACTTACAAATCCTATTGTCATGAGCTTTCCTGTTACTGGAGGTATAGGTTATGGACCACTGTCAGTGGGTCCAAGATGGCTGGCTTATAGTGGAAGCCCTGTTGTAGTCTCAAATTCTGGGCGTGTCAATCCCCAACATCTGACACCTTCTGCAAGTTTTCCTGGTTTTTCTTCGAATGGGAGCTTGGTTGCACACTATGCCAAAGAGTCAAGCAAGCAACTTGCTGCAGGCATAGTCACACTTGGAGATATAGGGTACAAGAAGCTTTCTAGATACTGCTCTGAGCTGCGACCTGATAGTAATGGTTCTTCACCATCTGCAAACTCTAGCTGGAAGGGCAATGGAACCAGTAATGGCCATTTGGGGGATTTGGATAATATTGGAATGGTCATTGTCAGAGACATTGTCAGTAAAAGTGTTGTTGCTCAATTCCGAGCCCACAAAAGTCCTATTTCAGCCTTATGCTTTGATCCTAGCGGCACTATTTTAGTGACTGCTTCAGTTCAGGGGCATAATATTAATGTTTTTAAGATAATGCCTGGACACTCTGACAGTTTGGCATCTGATGTTGGCGGTCCTTCTTATGTTCATCTTTATAGGCTACAGCGTGGCTTTACAAATGCAGTAATTCAAGATATCAGTTTCAGTGATGATAGTAACTGGATTATGATTAGTTCCTCAAGAGGCACTAGCCATTTGTTTGCCATAAATCCTCTAGGAGGATCTGTAAATATTCAGTCCTATGATGCAAGTTTTACATCAAAAAATGGTGGATTGGGCGTTATGACTGACCCAGCGGTTCAGTGGCCTCCTAATTTGAGTTCACAAATTCCTAAAGAACAGAGTATGTGCGCAACTGGGCCGCCAATCACACTTTCTGTTGTATGCAGGATTAGAAATGGAAATAATGGCTGGAGAAGCACTGTAAGTGGTGCAGCTGCTGCTGCAACAGGCAGAACAAGCTTGCAGTCTGGAGTTATTGCTTCGTCTTTTTGTAACTGCAAAGGGAGTGCCTTGTATGTTGGCGCGAACCGTTTTAAGACAAAATATCACCTGTTGGTTTTTTCATCAACTGGTTCTATGATACAATATGCTCTCGGGACATCAATGGGTCAAAATTCAGTAGTTTCTGGATTAACCCATGCATATGAATCTGCATTAGAGGTTGACACAAGATTGGTTGTTGAGGCTATTCAGAAGTGGAATATATGCCAGAGACACAATCGAAGAGAACGAGAGGATAATATGGACATATATGGTGAAAATGGAACTTCAGATAGCAACAAAATATATCCTGTAGAGATGAAGGATGAGAATACCAGTAGGTTAAAACTCGAGAATGTAATCATGAAAGTAAATTCCCAGCCTGACGAAGAGCATCATTTGTACTTTTCAGAAGCAGAACTTCAGACTCACCAAGCTCAAACTCCAGTGTGGGCAAAGCAAGAGATATATTTTCATCCAATGGTGAAAGAGGAGGGCATATTGAATGAGGAATCTACTTCAGAAGGGGAAATTGATGTTGAAAGAATTCCTACGCATGTAATTGAAGCTAGGGCCAAGGACTTAGTTCCAATTTTCGACTATCTTCAGCCACGAAGTTCCCAACAAACAAGGACTCCTTCTGTAAATGGTGAAGTAAATGAAGCACAGCTACATCAGACTTCTGTGATTCATGGTAAAGACACAATTTCAGAGGGAAGCAACAAAGACTCTACTGACTGGATGACAAATTATGGCGGCCTTGCACGCGAGATAGACAGCAACATTGTAGGGGATTGGAATGATCATCTGGGATCACTAGAAACTAACGGCTTTGTAAATAAGAATGACAGCGACACCCTTGAAGCCAATAATTGCGATGAGGTTGTAAATAATAGAGAGCACTTAAACATGGAGGCTCAACTCATGCTTGTAAATAATGACAAAGAAGGCTTCAAGAAAATGGAGAATCACTTTGAGGACAACTTGAAGTAA 2688 0.4234 MKKDDQKLHQGGPMPRPGRTNGLIPSSFRALSSYLRVVSSGASTVARSAASVASSILDRDSDADHDQVIWAGFDKLEVEGDVIRKVLLLGYRTGFQVWDIEDSKNVQDLVSRHDGPVSFMQMLSKPIASKRSEDKFADRWPLLVVCTDGIFAGGSNIQDGFVSSCNGSTLNCHDQVNGIYLPTTVQFYSLRSQSYVHVLKFRSAIYSVRCSSRVVAVAQSTQVHCFNATTLEREYTLLTNPIVMSFPVTGGIGYGPLSVGPRWLAYSGSPVVVSNSGRVNPQHLTPSASFPGFSSNGSLVAHYAKESSKQLAAGIVTLGDIGYKKLSRYCSELRPDSNGSSPSANSSWKGNGTSNGHLGDLDNIGMVIVRDIVSKSVVAQFRAHKSPISALCFDPSGTILVTASVQGHNINVFKIMPGHSDSLASDVGGPSYVHLYRLQRGFTNAVIQDISFSDDSNWIMISSSRGTSHLFAINPLGGSVNIQSYDASFTSKNGGLGVMTDPAVQWPPNLSSQIPKEQSMCATGPPITLSVVCRIRNGNNGWRSTVSGAAAAATGRTSLQSGVIASSFCNCKGSALYVGANRFKTKYHLLVFSSTGSMIQYALGTSMGQNSVVSGLTHAYESALEVDTRLVVEAIQKWNICQRHNRREREDNMDIYGENGTSDSNKIYPVEMKDENTSRLKLENVIMKVNSQPDEEHHLYFSEAELQTHQAQTPVWAKQEIYFHPMVKEEGILNEESTSEGEIDVERIPTHVIEARAKDLVPIFDYLQPRSSQQTRTPSVNGEVNEAQLHQTSVIHGKDTISEGSNKDSTDWMTNYGGLAREIDSNIVGDWNDHLGSLETNGFVNKNDSDTLEANNCDEVVNNREHLNMEAQLMLVNNDKEGFKKMENHFEDNLK 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1037 895 Gene3D - 65 494 IPR015943 GO:0005515
Prci6g1037 895 Pfam Breast carcinoma amplified sequence 3 524 762 IPR022175 -
Prci6g1037 895 MobiDBLite consensus disorder prediction 1 22 - -
Prci6g1037 895 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 21 811 IPR045142 GO:0006914
Prci6g1037 895 SMART WD40_4 192 227 IPR001680 GO:0005515
Prci6g1037 895 SMART WD40_4 374 414 IPR001680 GO:0005515
Prci6g1037 895 SMART WD40_4 431 472 IPR001680 GO:0005515
Prci6g1037 895 SUPERFAMILY WD40 repeat-like 85 474 IPR036322 GO:0005515
Prci6g1037 895 Pfam WD domain, G-beta repeat 378 407 IPR001680 GO:0005515
Prci6g1037 895 FunFam Breast carcinoma-amplified sequence 3 293 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1037 Prci-Chr6 7230438 7236947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1037 - - qlo:115955563 1149.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2006 7 34338167 34344966 Prci6g1037 6 7230438 7236947 CCT
Prci6g1037 6 7230438 7236947 Prci6g1037 6 7230438 7236947 ECH