Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1010 ATGGCTGGTGGAGGATTTACCAATGCTGGAGGCAAAAGGGCTCATCTTTATGAGTACAAGATTACTAGCTTTTTCATATTTTCTTGCATTGTCGGTGCCATGGGTGGCTCTCTCTTCGGCTATGATCTTGGTGTTTCCGGTGGCGTGACGTCCATGGATGATTTTCTGAAAGAGTTCTTCCCACGTGTTTATGCAAACAAGCATGCGCATCTTAGTGAGACAGATTATTGTAAATATGACGATCAGATATTGACATTGTTTACTTCGTCTCTGTACTTTGCGGCCTTGGTTTCAACATTTTTTGCTTCAAGTCTGACAAAGAACAAAGGTAGAAAAGCCAGCATCATCGTCGGATCTATAAGCTTCTTCATCGGGGCTGTAATCAATGCCGCTGCAATGAACATCGCCATGTTGCTCATTGGCCGTATCCTCCTCGGTGTCGGCATCGGATTTGGCAACCAAGCCGTTCCATTGTATCTTTCTGAAATGTCTCCAGCTAAAGTACGAGGAGCAGTGAATCAATTATTTCAGTTAACAACTTGTTTGGGAATTCTGGTAGCAACCTTGGTGAACTATGGCACGGAGCAACTACACCCATGGGGATGGAGATTATCTCTAGGTTTAGCCACAGTTCCTGCAACATTAATGTTCATAGGAGGCATGTTGTGCCCAGAGACACCAAATAGCCTCGTGGAACAAGGCAGGATGGAAGAAGCAAGAACCATACTAGAGAAGATCAGAGGAACCACTAACGTAGATGCAGAATTCGAAGATATGATTGAGGCAAGCAGAGAAGCTCAGGCCATAAAGAACCCATTCCAGAACTTGTTGCTCAGAAGGAACAGACCTCAGCTTGTGATTGGGGGGTTAGCTATCCCGGCTTTCCAGCAGCTGACTGGGAATAACTCAATCCTCTTCTATGCTCCTGTCATCTTTCAGAGTTTAGGCTTTGGGAATGGAGCTTCATTATATTCTTCTGTTATTACTAGTGTTGCCCTTGTCATGGCTCCTCTCATCTCAATGGCTGTCGTCGACAAGTTTGGCAGAAGAGCATTGTTCTTGGAAGCCGGTGCTGAAATGTTAATCTACTTGGTGGCAGTAGCAGTTGTTTTGGCATTAGAGTTTGGTGAAGGGAAAGACTTGTCAAGAGGGACAAGTATATTTCTAGTGATAGTGATATTCTTGTTTGTGTTGGCATATGGAAGATCGTGGGGTCCATTAGGTTGGCTAGTTCCGAGCGAGCTTTTCCCATTAGAGATAAGGTCGTCCGCACAGAGTGTGGTGGTGTGTGTGAATATGATCTTCACAGCGCTAGTGGCACAGTTCTTCCTGATGTCACTATGCCATCTCAGATATGGAATATTCTTGTTGTTCGGTGGGTTCATTGTGATCATGAGCATGTTCATATTATTCTTTTTGCCAGAAACAATGAAAGTTCCAATTGAGGAGATCTATTTGCTATTTCAAAACCACTGGTTCTGGAGAAGATTTACTTTAGAAGATCCATCCCAGTCCTTCAATAATACTGCTTAG 1533 0.439 MAGGGFTNAGGKRAHLYEYKITSFFIFSCIVGAMGGSLFGYDLGVSGGVTSMDDFLKEFFPRVYANKHAHLSETDYCKYDDQILTLFTSSLYFAALVSTFFASSLTKNKGRKASIIVGSISFFIGAVINAAAMNIAMLLIGRILLGVGIGFGNQAVPLYLSEMSPAKVRGAVNQLFQLTTCLGILVATLVNYGTEQLHPWGWRLSLGLATVPATLMFIGGMLCPETPNSLVEQGRMEEARTILEKIRGTTNVDAEFEDMIEASREAQAIKNPFQNLLLRRNRPQLVIGGLAIPAFQQLTGNNSILFYAPVIFQSLGFGNGASLYSSVITSVALVMAPLISMAVVDKFGRRALFLEAGAEMLIYLVAVAVVLALEFGEGKDLSRGTSIFLVIVIFLFVLAYGRSWGPLGWLVPSELFPLEIRSSAQSVVVCVNMIFTALVAQFFLMSLCHLRYGIFLLFGGFIVIMSMFILFFLPETMKVPIEEIYLLFQNHWFWRRFTLEDPSQSFNNTA 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1010 510 Gene3D MFS general substrate transporter like domains 17 491 IPR036259 -
Prci5g1010 510 Pfam Sugar (and other) transporter 29 485 IPR005828 GO:0016020|GO:0022857|GO:0055085
Prci5g1010 510 ProSiteProfiles Major facilitator superfamily (MFS) profile. 28 477 IPR020846 GO:0022857
Prci5g1010 510 NCBIfam sugar porter family MFS transporter 23 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci5g1010 510 CDD MFS_STP 31 475 IPR044778 GO:0015145|GO:0015749
Prci5g1010 510 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 16 498 IPR045262 GO:0015144
Prci5g1010 510 ProSitePatterns Sugar transport proteins signature 2. 144 169 IPR005829 GO:0016020|GO:0022857|GO:0055085
Prci5g1010 510 PRINTS Sugar transporter signature 139 158 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci5g1010 510 PRINTS Sugar transporter signature 36 46 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci5g1010 510 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci5g1010 510 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci5g1010 510 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci5g1010 510 SUPERFAMILY MFS general substrate transporter 27 483 IPR036259 -
Prci5g1010 510 FunFam Sugar transport protein 13 18 491 - -
Prci5g1010 510 ProSitePatterns Sugar transport proteins signature 1. 340 357 IPR005829 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1010 Prci-Chr5 28188933 28190790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1010 1 505 Organic Solute Cotransporters AT4G02050 57.505 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1010 K24193 - gmx:100802488 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g1010 5 28188933 28190790 Prci10g0315 10 2083687 2085658 ECH
Prci5g1010 5 28188933 28190790 Prci5g1010 5 28188933 28190790 ECH