Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0315 ATGTCAGCGGCAAAAGAGAAGGCCGTACAATTCCAGACGCCTGGTATCAATGAAACTGAAGAAAGTCCGAAGAAGCTCAACAAGCATGCTTGCGCTTCTGTGGTAGTTGCCTCTATCATCTCCATGATATATGGCTACACCATCGCAGTAATGTCCGGAGCTCTATTATTCATAAAGGAGGATCTTAAAATCAGTGACCCGCAAGTACAGCTTCTGGCAGGCATCTTAAACGCTTGCGCACTTCTAGGATCGTTGGCCTCCGGCAGAATCTCCGACGTCATGGGGCGGCGCTACACCATTATTGTGGCTTCCCTCTTATTCTTGGCGGGCTCCATCTTGATGGGCTACGGCCCATCATATCCAATCCTAATGATCGGAAGATGCGTTTCAGGATTTGGGGCGGGCTTTGCATTGCTGACAGCACCTGTTTACTGTGCAGAGATCTCGCCACCTTCTTCCAGAGGCTTACTAACGTCCGTTCCAGAATTGTCCATCAACGTGGGACTCCTGCTCGGCCACGCTTCAAACTACTGTTTCGGAAAGCTGAGCCTCAGACTCGGATGGAAGTTGATGGTAGGTGTTACAGCGATCCCTTCGCTAGGTCTGGCCATTCTCATGTTAAAAATGGTGGAGTCTCTGAGGTGGCTGGTCATGCAAGGCCGTGTGGGTGAGGCCAGAAAGGTGCTTTTACTCGTCTCTAATTCTGACCTTGAAGCCACAGAGCGCTTGCGGGGTATCAAAATCGCTGCTGGTATCGATGAAAATTGCGACCAAGACACTGTTCCGGTGCCAAAGAAGACGGGGGGTGGAGCAGGAGCTTTGAAAGCGCTATTGTATAGGCCTTCACATTCAGTACGGAGAATTCTTATTGCAGCAGTAGGAGTACACTTATTTCTGCAGCTAAGTGGATTCCATGCGTTTTTGGTATACACTCCAAGAATATTCGGGAAAGCAGGCATGTCCGATAAGAGCAAGGTGCTGCTAGCCACGGTGGGAATGGGAATCACCAAATTAATATTCACATTCGTGGCGGCGTTCTTGCTGGATAGAGCAGGGAGGAGGGTTCTGCTGCTCATCAGCTCAGGAGGTATAGTGGTCAGCTTGGTAGGATTGAGCGTGTGCTTGACAATGGTGGAACACTCTAGAGAGGAGCAAGAGTGGGCAGAGGGCGTCAGCATCGTGGCCGTTTATGGCTTTGTGGGTTTTATGGGGATAGGATTGGGGCCAGTGACGTGGGTTTACGGCTCGGAGATATTCCCCCTGAGGCTGAGAGCGCAGGGGCTTGGAATCTGTTCGGTGGTGAACAGTGTTACGGGGGTGGCAGTGGTGATGACGTTTATAACAGTGTATGAAAAGATAACCATGGGTGCGTTGTTCTGTGTGTTCACAGGGGCTACTGCCACTGCTTGGTGGTTCTACTACCTTTTCTTGCCTGAGACCAAGGGAAGGTCGCTGGAGGACATGGAGGCCGTCTTTGGGAAATGTCCTGCCTCCAAGCTTCAACCACCTGATTCCAATCATTCATAG 1527 0.5075 MSAAKEKAVQFQTPGINETEESPKKLNKHACASVVVASIISMIYGYTIAVMSGALLFIKEDLKISDPQVQLLAGILNACALLGSLASGRISDVMGRRYTIIVASLLFLAGSILMGYGPSYPILMIGRCVSGFGAGFALLTAPVYCAEISPPSSRGLLTSVPELSINVGLLLGHASNYCFGKLSLRLGWKLMVGVTAIPSLGLAILMLKMVESLRWLVMQGRVGEARKVLLLVSNSDLEATERLRGIKIAAGIDENCDQDTVPVPKKTGGGAGALKALLYRPSHSVRRILIAAVGVHLFLQLSGFHAFLVYTPRIFGKAGMSDKSKVLLATVGMGITKLIFTFVAAFLLDRAGRRVLLLISSGGIVVSLVGLSVCLTMVEHSREEQEWAEGVSIVAVYGFVGFMGIGLGPVTWVYGSEIFPLRLRAQGLGICSVVNSVTGVAVVMTFITVYEKITMGALFCVFTGATATAWWFYYLFLPETKGRSLEDMEAVFGKCPASKLQPPDSNHS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0315 508 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 18 493 - -
Prci10g0315 508 Pfam Sugar (and other) transporter 34 492 IPR005828 GO:0016020|GO:0022857|GO:0055085
Prci10g0315 508 PRINTS Sugar transporter signature 299 309 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci10g0315 508 PRINTS Sugar transporter signature 124 143 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci10g0315 508 PRINTS Sugar transporter signature 393 414 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci10g0315 508 PRINTS Sugar transporter signature 41 51 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci10g0315 508 PRINTS Sugar transporter signature 416 428 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci10g0315 508 Gene3D MFS general substrate transporter like domains 22 495 IPR036259 -
Prci10g0315 508 FunFam probable polyol transporter 4 23 495 - -
Prci10g0315 508 NCBIfam sugar porter family MFS transporter 28 487 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci10g0315 508 ProSiteProfiles Major facilitator superfamily (MFS) profile. 33 481 IPR020846 GO:0022857
Prci10g0315 508 SUPERFAMILY MFS general substrate transporter 20 489 IPR036259 -
Prci10g0315 508 ProSitePatterns Sugar transport proteins signature 2. 129 154 IPR005829 GO:0016020|GO:0022857|GO:0055085
Prci10g0315 508 ProSitePatterns Sugar transport proteins signature 1. 87 104 IPR005829 GO:0016020|GO:0022857|GO:0055085
Prci10g0315 508 ProSitePatterns Sugar transport proteins signature 1. 344 361 IPR005829 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0315 Prci-Chr10 2083687 2085658 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0315 21 494 Organic Solute Cotransporters AT4G36670 52.954 3.79e-180 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0315 - - gmx:100786322 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g1010 5 28188933 28190790 Prci10g0315 10 2083687 2085658 ECH
Prci10g0315 10 2083687 2085658 Prci10g0315 10 2083687 2085658 ECH