Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0122 ATGCCTTCTGGTTATCTATCAAAGCTGAATGCTACCATTTACTGTCGTTTTCGAGAAGGAATAACTCGGCAACAAGGGGTGCGATCTTTGCTATATAGACGTTCGTCTGCGTCTCTTTCTTCACTTTGCTCAACTTCATTTTCATCTGATGCCAATCCTTCTTTTTCAAGCCAAACGCTTAAAAATAAATTAATGGCTGCTTCAACTTCCATAGCTGTACTGGGAGATGTTTTTGTCCATGATGTCATCACTAGCCGTAGCAATACGCTAGACTTCAAAAAGCCTGGCGCTGTTTACTTTGGTGATAGAACTCGTGAAGGCTACATAAGAGATCATTTGAACTTGAAAAGAAAAGATCCATTTGCTCTTAATATTAGGCATTCGACTCTCGATGCTATTTCAAGTTTTCCTCATCGACCATTGCTGAAGAATTTCTCTACTACATCTTGTACTTCCTACTTTGCTCGGGCAGCGCACAATGTCTCATTTGACAGCGGCACTTGTGCTGAAGAGCTTGAAAATTCCTCCCCACTAGACCCAACAATTGCTGGCGGTGAGACTTTGAAGCTATTTTCAGGATCTAGTTACCTACCACATCCAGATAAGGAGGAGACAGGTGGAGAAGATGCTCATTTTATTTGGGATGAACAAGCAATTGGTGTTGCAGATGGTGTAGGTGGTTGGGCTGAAGTTGGTGTTAATGCAGGACTGTTTTCTCGTGAACTCATGTCCAATTCAGTAAGAGCAATCCAGGAGGAGCCAAAAGGTTCTATTGATCCAGTAAGGGTGTTAGAGAAGGCTCACTTAAGCGCAAGGGCCAAGGGTTCATCAACAGCCTGTATCATTGCCCTTGCTGAGAAGGAGCTTCAAGCTATTAATTTGGGTGACAGTGGATTCATTGTGGTTAGAGATGGAAGCACCATCTTCAAGTCCCCTGTTCAACAGCATGGCTTCAATTTCACATATCAATTGGAGAGTGGCGATGGCGGTGATTTACCCAGTTCTGGTGAGGTGTTTACAGTGCCTGTTGCCGCAGGAGACGTGGTGATTGCGGGAACAGATGGATTATTTGACAACTTGTATAATAATGAAATTACAGCAGTTGTAGTGCACGGAATTAGAGCGGGACTAGAACCCCAAGTAACTGCACAGAAGATAGCAGCACTAGCCCGTCAGCGAGCACAGGACAGAAATAGGCAGACTCCATTCTCAGCTGCTGCTCAAGATGCCGGCTTCCTGTATTATGGTGGCAAGCTCGATGACGTTACCGTTGTTGTATCACACATAACCTCAGTAAATTCCTGA 1305 0.4429 MPSGYLSKLNATIYCRFREGITRQQGVRSLLYRRSSASLSSLCSTSFSSDANPSFSSQTLKNKLMAASTSIAVLGDVFVHDVITSRSNTLDFKKPGAVYFGDRTREGYIRDHLNLKRKDPFALNIRHSTLDAISSFPHRPLLKNFSTTSCTSYFARAAHNVSFDSGTCAEELENSSPLDPTIAGGETLKLFSGSSYLPHPDKEETGGEDAHFIWDEQAIGVADGVGGWAEVGVNAGLFSRELMSNSVRAIQEEPKGSIDPVRVLEKAHLSARAKGSSTACIIALAEKELQAINLGDSGFIVVRDGSTIFKSPVQQHGFNFTYQLESGDGGDLPSSGEVFTVPVAAGDVVIAGTDGLFDNLYNNEITAVVVHGIRAGLEPQVTAQKIAALARQRAQDRNRQTPFSAAAQDAGFLYYGGKLDDVTVVVSHITSVNS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0122 434 FunFam 5-azacytidine resistance protein azr1 199 323 - -
Prci5g0122 434 Pfam Stage II sporulation protein E (SpoIIE) 218 428 IPR001932 -
Prci5g0122 434 SUPERFAMILY PP2C-like 196 426 IPR036457 -
Prci5g0122 434 SMART PP2C_SIG_2 203 429 IPR001932 -
Prci5g0122 434 Gene3D - 200 325 IPR036457 -
Prci5g0122 434 Gene3D - 332 432 IPR036457 -
Prci5g0122 434 PANTHER PROTEIN PHOSPHATASE 2C 120 432 IPR039123 -
Prci5g0122 434 SMART PP2C_4 181 427 IPR001932 -
Prci5g0122 434 ProSiteProfiles PPM-type phosphatase domain profile. 194 429 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0122 Prci-Chr5 1900988 1905358 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0122 K17508 - qsu:112039138 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0320 10 2178108 2182104 Prci5g0122 5 1900988 1905358 CCT
Prci5g0122 5 1900988 1905358 Prci5g0122 5 1900988 1905358 ECH
Prci5g0122 5 1900988 1905358 Prci10g0320 10 2178108 2182104 ECH