Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0320 ATGGCTGCTTCGACTTCCAAAGCTTTCCTGGGAGATATCTATGTGGATGATATTGCCACAAGTTGCAGCAGTGCACTAGACATTGTCACTAAGCATACTGGTGTTTACTTCAAAGACAGAAGTCGCAAAGGTTGCCTGAGAGCTAGTGTGGATAGTAGAAGGCCAGAACCGTTGAATGGTCCTCTGAGTTCTCGATATTCCATTTTTTATGCTAACTGGAGGAAGCAGAACTCTAGCTTGCATCATGGACCATGGCTGAAGAATTTCTCTGTTACCTCTCCTGCTTGTTTCTCAGCTGGAGCTGCACAAGAAGTCTCATGTGATGGCAACACTTCTGATGACCAACTTGCAAATTCTTCCATTTCTCCTGAGCAACCCATTGGAAGTGAGAGGACCTTGACGCTGGTCGCAGGATCATGTTACCTGCCTCATCCAGATAAGGAGGAGACGGGAGGAGAAGATGCTCATTTTATTTGCACGGACAAACAAGCAATCGGTGTTGCAGATGGTGTAGGGGGCTGGGCTGATGTTGGTGTTAATGCAGGAATTTTTGCTCGTGAGCTTATGTCTAATTTAGTAAGAGCAATTCAAGAGGAGCCCCAAGGTTCTATTAATCCGTTGAGGGTGTTAGAGAGGGCTCACTCAAGTACAAAGGCCAAGGGTTCATCAACAGCTTGTATCATTGCCCTTACTGATAAGGGACTACATGCTATTAACCTGGGTGACAGTGGATTCGTTGTGATTAGAGATGGACGCACCGTTTTCAAGTCCCATTTTCAACAGCATGGCTTCAATTTTACATATCAATTGGAGAGTGGCAATGGAGGCGATCTACCTAGCTCTGGCGAGGTTTCTGTAATGCCTGTCGCCCTGGGAGACGTTGTCGTTGCTGGAACCGATGGACTATTTGACAACTTGTACAACAATGAGATTACTGCGATTGTTGCGGAGGCAGTAAGGGATAGACTGGAACCGCAAATAGCTGCTCAGAAGATAGCAGCACTAGCTCGTCATAGGGCAATGGACCGGAATCGGCGGACACCATTTTCTGTTGCTGCTCAAGAAGCTGGGTTCCGCTATCTTGGTGGCAAGCTTGATGACATTACGGTTGTCGTTTCGTATATAACAGAGCTCAATTAG 1140 0.4658 MAASTSKAFLGDIYVDDIATSCSSALDIVTKHTGVYFKDRSRKGCLRASVDSRRPEPLNGPLSSRYSIFYANWRKQNSSLHHGPWLKNFSVTSPACFSAGAAQEVSCDGNTSDDQLANSSISPEQPIGSERTLTLVAGSCYLPHPDKEETGGEDAHFICTDKQAIGVADGVGGWADVGVNAGIFARELMSNLVRAIQEEPQGSINPLRVLERAHSSTKAKGSSTACIIALTDKGLHAINLGDSGFVVIRDGRTVFKSHFQQHGFNFTYQLESGNGGDLPSSGEVSVMPVALGDVVVAGTDGLFDNLYNNEITAIVAEAVRDRLEPQIAAQKIAALARHRAMDRNRRTPFSVAAQEAGFRYLGGKLDDITVVVSYITELN 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0320 379 Pfam Protein phosphatase 2C 152 333 - -
Prci10g0320 379 ProSiteProfiles PPM-type phosphatase domain profile. 139 375 IPR001932 -
Prci10g0320 379 FunFam 5-azacytidine resistance protein azr1 144 269 - -
Prci10g0320 379 SUPERFAMILY PP2C-like 139 372 IPR036457 -
Prci10g0320 379 PANTHER PROTEIN PHOSPHATASE 2C 103 377 IPR039123 -
Prci10g0320 379 CDD PP2Cc 152 372 IPR001932 -
Prci10g0320 379 Gene3D - 145 272 IPR036457 -
Prci10g0320 379 SMART PP2C_4 130 373 IPR001932 -
Prci10g0320 379 SMART PP2C_SIG_2 135 375 IPR001932 -
Prci10g0320 379 Gene3D - 273 378 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0320 Prci-Chr10 2178108 2182104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0320 K17508 - qsa:O6P43_033738 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0320 10 2178108 2182104 Prci5g0122 5 1900988 1905358 CCT
Prci10g0320 10 2178108 2182104 Prci10g0320 10 2178108 2182104 ECH
Prci5g0122 5 1900988 1905358 Prci10g0320 10 2178108 2182104 ECH