Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2871 ATGCCGGGAATATCTGATAATGGAGTTAATGATGAGGGGGAAGCAAATGAAAGGAACATAAATCCTCCCCCCTCTAAGGAAACATCAACTCTAATTGAGTCACAACATCCTGAGGGTACAGGTGTTGAAGCTTCCGTTGACACCTCTATTGATCAGCTTTATGAAAATGTGTATGACATGCAAAGTTCTGATCGGTCACCTTCAAGGCGAAGTTTTGGATCTGATGGTGATGAGTCTAGGATTGATTCGGAATTGCATCATCTAGTTGGAGGGCCGATGAGGGAGGTGGAGATAATGGAAGAAGAAATGGAGGAAAAGCAAGGTGGTGATGGAAGTAGTGAAGCATCTTCTAGAAAGGGTGGTACGTTGAATGATAGGAAGATGGATAGTGTGGATACGATTCAACCTGCAAGTACAAGTTCTGGCACCTCTGAAAAACCAACCAAATCATCCAATGCAAAATTACAGTCCAAGACAGCGTTAAAATCAAAACCCAAAGTCAAAAGTCCTCCTGTAAAGCCTTCTTTTGAGAAAAAGAATGATAAGCCTCAGAAAAAACAAAGCGCAGGAGTTGTTAGCTCCAAGAAACCACAAAATGCTCCTTCTGGAAGGTCAGTGTCTCTGAGTCGTGCCAAGAATTCAGTTGAACCAGCATCAGATAAGCCAGAGATGGGACCAATTTTGCTTAAGCAGGCGGCAGATCTGATGTCATCAGGGGATAATCCACATAAGGCTCTTAAATTGGCTCTTCGAGCTATGAAAGTGTTTGAGAAGTATGCTGGCGAGAAACCAAGTCTGGAGCTTGTTATGAGTTTACATGTTGCAGCAGCAATATACTGTAGCTTGGGTCAATACAATGATGCGATTCCTGTTCTTGAGCGCTCAATTGAAATTCCTGTTATTGAGGAAGGTGAGGAGCATGCCCTAGGTAAATTTGCTGGTCTTATGCAAGTGGGTGACACCTACGCAATGCTGGGCCAGCTTGAGAATGCAATTACGTACTACACCAAAGGTTTGGAAGTCCAGAAACAGATTTTGGGAGAAACAGATCAGAGAGTTGGTGAAACTTGTCGGTACCTGGCTGAAGCTCATGTTCAATCATTGCAATTTGATGAGGCTGAGAGGCTCTGCCAAATGGCTTTGGACATTCATAGAGCAAGAGATTCACCCCCTTCTGTTGAAGAGGCAGCAGATAGGAGGCTTATGGGCCTTATATGTGAAACAAAGGGAAAGCATGAAGCAGCTCTGGAGCATCTTGTTTTAGCGAGCATGGCAATGGTAGCGAATGGACAAGACGCGGAAGTGGCATCTGTTGATTGTGGCATTGGAGACACGTATCTATCCTTGTCTCGATATGATGAAGCTGCTTTTGCTTATCAAAAAGCACTTACAGCTTTCAAGGCCAGCAAGGGAGAGAATCATCCGGCTGTGGCTTTGGTTTTTGTACGTTTAGCTGACTTGTATAAGAGGACAGGGAAAGTAAAGGAATCCAAATCTTACTGTGAGAGTGCACTTAAAATCTATGAGAAGCCTCTTCCTGGGGTCCTTCTCGAGGAAATTGCAAGTGGTCTCACTGATGTTGCCGCTATCTATGAGTCGATGAATGAGCATGAACAGGCGCTCAATTTACTGAAAAAGGCATTGAGTATATACAACGATGCCCCTGGTCAGCAAAGCACAATAGCAGGAATTGAAGCTCAGATGGGAGTCTTGTACTACATCGTGGAGGACTATAATGAATCTTACAATGCGTTCAAGAATGCTATCTCAAAGCTTCGTGCTATTGGAGAGAAGAAATCAGCCTTCTTTGGTGTTGCACTTAATCAAATGGGACTTTCCTGCGTGCAGCGTTATGCCTTAAGTGAGGCTGCAGAATTGTTTGAAGAGGCAAAGAATATTTTGGAACAAGAGTATGGACCGTATCACCCTGAAACACTTGGCGTATATAGCAATCTTGCAGGCACATATGATGCACTTGGAAGGTTGGATGATGCAATTGAAATTCTGGAGTACGTTGTTAGTTTAAGGGAGGAAAAACTGGGGACTGCAAATCCTGATGTTTATGATGAGAAGAGAAGGCTGAGTGAGTTGCTGAAGGAAGCGGGTAGAGTTCGGAGCAGAAAATCCATATCACTGGAGCGCCTTCTTGATTCAAACGTTTATGCTCTAAATAATTTTGTCATGAGGATGGCTAGCTAG 2199 0.437 MPGISDNGVNDEGEANERNINPPPSKETSTLIESQHPEGTGVEASVDTSIDQLYENVYDMQSSDRSPSRRSFGSDGDESRIDSELHHLVGGPMREVEIMEEEMEEKQGGDGSSEASSRKGGTLNDRKMDSVDTIQPASTSSGTSEKPTKSSNAKLQSKTALKSKPKVKSPPVKPSFEKKNDKPQKKQSAGVVSSKKPQNAPSGRSVSLSRAKNSVEPASDKPEMGPILLKQAADLMSSGDNPHKALKLALRAMKVFEKYAGEKPSLELVMSLHVAAAIYCSLGQYNDAIPVLERSIEIPVIEEGEEHALGKFAGLMQVGDTYAMLGQLENAITYYTKGLEVQKQILGETDQRVGETCRYLAEAHVQSLQFDEAERLCQMALDIHRARDSPPSVEEAADRRLMGLICETKGKHEAALEHLVLASMAMVANGQDAEVASVDCGIGDTYLSLSRYDEAAFAYQKALTAFKASKGENHPAVALVFVRLADLYKRTGKVKESKSYCESALKIYEKPLPGVLLEEIASGLTDVAAIYESMNEHEQALNLLKKALSIYNDAPGQQSTIAGIEAQMGVLYYIVEDYNESYNAFKNAISKLRAIGEKKSAFFGVALNQMGLSCVQRYALSEAAELFEEAKNILEQEYGPYHPETLGVYSNLAGTYDALGRLDDAIEILEYVVSLREEKLGTANPDVYDEKRRLSELLKEAGRVRSRKSISLERLLDSNVYALNNFVMRMAS 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2871 732 MobiDBLite consensus disorder prediction 128 163 - -
Prci4g2871 732 Pfam Tetratricopeptide repeat 606 677 - -
Prci4g2871 732 Pfam Tetratricopeptide repeat 435 510 - -
Prci4g2871 732 ProSiteProfiles TPR repeat profile. 312 345 IPR019734 GO:0005515
Prci4g2871 732 MobiDBLite consensus disorder prediction 21 69 - -
Prci4g2871 732 ProSiteProfiles TPR repeat profile. 521 554 IPR019734 GO:0005515
Prci4g2871 732 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 41 719 - -
Prci4g2871 732 MobiDBLite consensus disorder prediction 1 224 - -
Prci4g2871 732 SUPERFAMILY TPR-like 561 704 IPR011990 GO:0005515
Prci4g2871 732 Gene3D Tetratricopeptide repeat domain 424 602 IPR011990 GO:0005515
Prci4g2871 732 Gene3D Tetratricopeptide repeat domain 143 312 IPR011990 GO:0005515
Prci4g2871 732 Coils Coil 534 554 - -
Prci4g2871 732 Gene3D Tetratricopeptide repeat domain 313 423 IPR011990 GO:0005515
Prci4g2871 732 SMART tpr_5 436 469 IPR019734 GO:0005515
Prci4g2871 732 SMART tpr_5 354 387 IPR019734 GO:0005515
Prci4g2871 732 SMART tpr_5 478 511 IPR019734 GO:0005515
Prci4g2871 732 SMART tpr_5 312 345 IPR019734 GO:0005515
Prci4g2871 732 SMART tpr_5 604 637 IPR019734 GO:0005515
Prci4g2871 732 SMART tpr_5 646 679 IPR019734 GO:0005515
Prci4g2871 732 SMART tpr_5 269 302 IPR019734 GO:0005515
Prci4g2871 732 SMART tpr_5 521 554 IPR019734 GO:0005515
Prci4g2871 732 SMART tpr_5 562 595 IPR019734 GO:0005515
Prci4g2871 732 Pfam MalT-like TPR region 273 424 IPR041617 -
Prci4g2871 732 Gene3D Tetratricopeptide repeat domain 603 716 IPR011990 GO:0005515
Prci4g2871 732 MobiDBLite consensus disorder prediction 186 214 - -
Prci4g2871 732 SUPERFAMILY TPR-like 432 554 IPR011990 GO:0005515
Prci4g2871 732 MobiDBLite consensus disorder prediction 171 185 - -
Prci4g2871 732 MobiDBLite consensus disorder prediction 70 112 - -
Prci4g2871 732 Pfam Tetratricopeptide repeat 523 554 - -
Prci4g2871 732 SUPERFAMILY TPR-like 229 384 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2871 Prci-Chr4 40677895 40681653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2871 - - gmx:100783201 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2871 4 40677895 40681653 Prci9g1666 9 28904507 28908349 CCT
Prci4g2871 4 40677895 40681653 Prci9g1666 9 28904507 28908349 ECH
Prci4g2871 4 40677895 40681653 Prci4g2871 4 40677895 40681653 ECH