Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3666 ATGGCTCCCGATATCACCGTCGCCGTTGCCAACGCTGCCGCCATCCAAGCAAAGGCCAGCGGGAGGGACCGTGCCTTCGTGACTTTCCTGGCCGGAAATGGTGACTACGTGAAGGGAGTGGTAGGACTCGCCAAAGGTCTGAGGAAGGTGAAGAGTAAGTACCCTCTGGTGGTTGCTATTCTGCCAGATGTGCCCCAGGAGCACCGTCAGATTCTGATCGGTCAAGGCTGCATCATCCGCGAGATCGAGCCGGTCCACCCTCCGGAGAACCAAACCCAGTTCGCCATGGCTTATTATGTCATCAATTACTCTAAGCTGCGCATCTGGGAGTTGGTGGAGTACAGCAAGATGATCTATCTTGATGGAGACATCCAAGTGTTTGACAACATAGACCACCTTTTTGATTTGCCAAACGGGTACTTCTACGCCGTGATGGACTGTTTCTGTGAGAAAACTTGGAGCCACACCCCACAGTACAAGATCGGCTACTGTCAGCAGTGCCCTGATAAGGTTCAGTGGCGAGCCGAGCTTGGACCCAAGCCTCCACTATACTTCAACGCTGGGATGTTTGTTTGCGAGCCCAGTCTCTCCACGTACCGTGACCTCCTGAAGACCCTCCTGGTCACCGAGCCTACTTCCTTCGCTGAGCAGGACTTTCTGAACATGTACTTTAAGGACAAATATAAGCCCATACCGAACGTTTACAACCTTGTGCTGGCCATGCTGTGGCGTCATCCCGAGAACGTTGAGCTTCACAAAGTGAAAGTGGTTCACTACTGTGCTGCTGGGTCAAAGCCATGGAGATACACAGGGAAAGAGGAAAATATGGACAGGGAAGACATCAAGATGCTAGTAGACAAATGGTGGGATATATACGAGGACGAAACCTTGGACAATGCGAACCCAGTGAATATAGAGCGTATTCAAGAGGCACTATCCGAGGCTGCTAGGGTTGCATTCGTTCCCGCCCCCTCTGCCGCTTAG 984 0.5224 MAPDITVAVANAAAIQAKASGRDRAFVTFLAGNGDYVKGVVGLAKGLRKVKSKYPLVVAILPDVPQEHRQILIGQGCIIREIEPVHPPENQTQFAMAYYVINYSKLRIWELVEYSKMIYLDGDIQVFDNIDHLFDLPNGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVQWRAELGPKPPLYFNAGMFVCEPSLSTYRDLLKTLLVTEPTSFAEQDFLNMYFKDKYKPIPNVYNLVLAMLWRHPENVELHKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVDKWWDIYEDETLDNANPVNIERIQEALSEAARVAFVPAPSAA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3666 327 Pfam Glycosyl transferase family 8 28 270 IPR002495 GO:0016757
Prci3g3666 327 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 297 IPR029044 -
Prci3g3666 327 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 22 301 IPR029044 -
Prci3g3666 327 CDD GT8_Glycogenin 24 294 - -
Prci3g3666 327 PANTHER GLYCOGENIN SUBFAMILY MEMBER 14 304 - -
Prci3g3666 327 FunFam Hexosyltransferase 22 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3666 Prci-Chr3 46036275 46038014 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3666 1 327 Glycosyltransferase AT1G56600 74.184 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3666 K18819 - gmx:548050 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3666 3 46036275 46038014 Prci3g3666 3 46036275 46038014 ECH
Prci1g4141 1 56379556 56381530 Prci3g3666 3 46036275 46038014 ECH