Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4141 ATGGCCCCTGAGCTCGTCCCCACCGTAGTCAAATCCGGTGGCTTCACCCCCCCGGCCACCCTGCGCAGTCGAGCTTATGTCACATTTCTTGCCGGAAATGGAGACTACGTCAAAGGCGTTGTCGGTCTGGCGAAGGGTTTGAGGAAGGTGAGGTCGGCGTATCCCTTGGTGGTGGCCGTCCTCCCGGACGTACCGGAGGAGCACCGTCGGATCCTAGAGTCTCAGGGCTGCGTCGTCCGCGAGATTGAACCCGTTTACCCTCCGGAGAACCAGACTCAATTTGCCATGGCCTATTACGTCATCAACTACTCTAAGCTCCGTATTTGGGAGTTCGTGGAATATAGCAAGATGATATATTTGGACGGAGACATTCAAGTGTACGACAACATTGATCACTTATTTGATCTGCCGGACGGACACTTGTACGCTGTCATGGACTGCTTCTGCGAGAAGACATGGAGTCACACCCCGCAGTACAGGATCCGATACTGCCAGCAATGTCCGGGCAAGGTGCAGTGGCCGGCGGAGATGGGTGAACCCCCTGCTCTGTACTTCAACGCTGGAATGTTCGTGTTCGAGCCCGGCATGGAGACATACCACGATCTCTTGAAAACACTCCAAATTACTCCTCCCACGCCTTTTGCAGAGCAGGATTTCTTGAACATGTACTTCAAGCCCATTTACAAGCCAATTCCCTTGGTCTACAACCTTGTCCTGGCTATGTTGTGGCGCCATCCCGAGAACGTGGAACTTGACAAAGTCAAAGTTGTCCACTACTGCGCTGCGGGATCGAAGCCGTGGAGATATACGGGGAAGGAAGAGAACATGAATAGAGAGGACATAAAGATGCTGGTCAAGAAATGGTGGGACATATACAACGATGAAACCTTGGATTACGACAAGGGCAGGAGTGGAGTGGAAGGCGATGCTGGATCAATGAAGAGGGGATCGTTGATAGCAGCGATGTCGGAGGCTGGTCAACTTCCGTATATAACAGCCCCTTCTGCCGCCTGA 1014 0.5296 MAPELVPTVVKSGGFTPPATLRSRAYVTFLAGNGDYVKGVVGLAKGLRKVRSAYPLVVAVLPDVPEEHRRILESQGCVVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVYDNIDHLFDLPDGHLYAVMDCFCEKTWSHTPQYRIRYCQQCPGKVQWPAEMGEPPALYFNAGMFVFEPGMETYHDLLKTLQITPPTPFAEQDFLNMYFKPIYKPIPLVYNLVLAMLWRHPENVELDKVKVVHYCAAGSKPWRYTGKEENMNREDIKMLVKKWWDIYNDETLDYDKGRSGVEGDAGSMKRGSLIAAMSEAGQLPYITAPSAA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4141 337 FunFam Hexosyltransferase 22 300 - -
Prci1g4141 337 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 296 IPR029044 -
Prci1g4141 337 PANTHER GLYCOGENIN SUBFAMILY MEMBER 21 327 - -
Prci1g4141 337 Pfam Glycosyl transferase family 8 28 270 IPR002495 GO:0016757
Prci1g4141 337 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 21 298 IPR029044 -
Prci1g4141 337 CDD GT8_Glycogenin 24 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4141 Prci-Chr1 56379556 56381530 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4141 1 337 Glycosyltransferase AT1G56600 73.913 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4141 K18819 - pop:7455409 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4141 1 56379556 56381530 Prci1g4141 1 56379556 56381530 ECH
Prci1g4141 1 56379556 56381530 Prci3g3666 3 46036275 46038014 ECH