Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3584 ATGTTTGTACCTTCCGTTCGAACCAAGAAAACATCGGCCGTTGGGATTCCCACCATCGACCTTTCGATGCAAAGGTCTGAGTTATCGGAACTGGCGGTGAGAGCCTGCGAGCAATATGGAATCTTCAAGGTGGTCAACCATAGGGTGCCTAAGCGGGTCCTCTTGAGATTGGAAGAGGAAGGCAATCGGTTCTTCTCCCAACCCGTCTCCGAGAAGCTGCTAGCCAGCCCCGCCGCTCCGTTCGGCTACGGTTCCAGGAACATTGGTTCCCACGGCGATGTGGGCGAGCTCGAGTATCTTCTTCTCCATACCGATCCTCAATCCATTTCTCAGGTTTCCAAAACTATCTCCTCAAAAGACCCTGCCAAATTCAGTTGTGCGGTGAATGAGTACATAGAAGCGGCAAGGGAAGTGGCGTGTGAGATACTGGAGCTAGTGGCGGAGGGATTGAGGATTCCGGACAAGATGGCGATCAGCAGGCTAATCAGGGACGCGCACAGTGACTCGGTGCTGAGGCTGAATCACTACCCTGCCACTGACCCGTGCCATGATGAAGTGGTGGCCACTAATAGCATCGGCTTTGGGGAACACTCTGACCCTCAGATCCTCACCGTCCTCCGCTCCAACGACGTCAGCGGCCTGCAGATCTCCACCCAAGACGGCCTCTGGATCCCCGTCCCCCCCGACCCGTTCGAATTCGTCGTCATGGTCGGCGATTCCCTCCAGGCATTGACGAATGGGAGATTTAGAAGCGTGAGGCACAGAGCGGTGACGAGCGGGAGCAAGTCCAGAATGTCCATGATATTCTTTGGAGCGCCCGCACTGAATTCCTGGATCACTCCCCTCCCCGTGTTGCTGTCCCCACACCAGCGGCCTCTGTACAAGCCCTTCACCTGGGCTCAGTACAAGCAGGCCGCCTACTCTCTCGCCCTCCAACACGCTCGCCTCGATCTCTTTAAAGCTCCAGACTCTCCCCTCCTCATTTCTGCCTCTCCCTGA 999 0.5626 MFVPSVRTKKTSAVGIPTIDLSMQRSELSELAVRACEQYGIFKVVNHRVPKRVLLRLEEEGNRFFSQPVSEKLLASPAAPFGYGSRNIGSHGDVGELEYLLLHTDPQSISQVSKTISSKDPAKFSCAVNEYIEAAREVACEILELVAEGLRIPDKMAISRLIRDAHSDSVLRLNHYPATDPCHDEVVATNSIGFGEHSDPQILTVLRSNDVSGLQISTQDGLWIPVPPDPFEFVVMVGDSLQALTNGRFRSVRHRAVTSGSKSRMSMIFFGAPALNSWITPLPVLLSPHQRPLYKPFTWAQYKQAAYSLALQHARLDLFKAPDSPLLISASP 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3584 332 Pfam non-haem dioxygenase in morphine synthesis N-terminal 16 85 IPR026992 -
Prci3g3584 332 Pfam 2OG-Fe(II) oxygenase superfamily 168 270 IPR044861 -
Prci3g3584 332 PRINTS Isopenicillin N synthase signature 32 49 - -
Prci3g3584 332 PRINTS Isopenicillin N synthase signature 197 218 - -
Prci3g3584 332 PRINTS Isopenicillin N synthase signature 233 259 - -
Prci3g3584 332 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 273 IPR005123 -
Prci3g3584 332 SUPERFAMILY Clavaminate synthase-like 6 311 - -
Prci3g3584 332 FunFam Gibberellin 2-beta-dioxygenase 2 2 310 - -
Prci3g3584 332 Gene3D - 3 310 IPR027443 -
Prci3g3584 332 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 16 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3584 Prci-Chr3 45406937 45409604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3584 7 312 Glycosyltransferase AT5G59530 27.532 4.10e-23 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3584 K04125 - gmx:100809097 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4138 1 56350204 56353373 Prci3g3584 3 45406937 45409604 CCT
Prci3g3584 3 45406937 45409604 Prci3g3584 3 45406937 45409604 ECH