Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4138 ATGGTTGTTCCTTCTTCAAATTCCATGAGAACCAAGAAAACAAATGCCGTGAGAATTCCGACCGTGGACCTTTCCTTGGAAAGGTCAGAGTTATTGGAATTGGTGATAAAGGCCTGCGAGCAATATGGTTTCTTCAAGGCGGTGAACCACGGCGTGCCGGAGGAGGTCATTTCCAGATTGGAAAATGAAGGAATTGAATTCTTTTCCAAATCCACCTCAGAGAAGCGACAGGCTGGTCCGGCCGCACCGTTTGGTTACGGTTGTAGAAACATAGGCCCCAATGGCGACATGGGTGACCTCGAGTATCTTCTTCTTCATACAAATCCTCTCTCCATCTCTGACAGATCCAAAACAATCTCCAACGACCCTAACAACTTCAGTTGCGCAGTGAATGATTACATAGAAGCAGTGAGGGAGCTGGCTTGTGAGGTGGTGGAGCTAGTGGCGGAGGGGCTGTGGGTCCCAGACAAGTACGCGGTGAGCAAGCTGATCAGGGACGCGCATAGCGACTCGGTGCTGAGGATCAATCACTACCCTCCTACCAAGAGCAGCAGCAAGTGGGAGCCATCGATTGGGTTCGGGGAACATTCTGACCCTCAGATCCTAACGATCCTACGGTCCAACGAGGTCGGTGGACTCCAGATCTGCACGCAGGAAGGGCTGTGGATCCCAGTGGCCCCGGACCCCACCGAGTTCTTCGTCATGGTGGGCGATGCCCTCCAGGTGATGACGAATGGGAGGCTGAGGAGCGTGAGGCACAGAGTGATGAGGAGCACGATAAGGAAAGGAAGAGTGTCGACGATGTACTTTGCGGCGCCGCCGCCGAGCTCGTGGATAACTCCGCTGCCGAAGATGGTGTCAGCTCAGAGGCCGAGCGAGTACAGGCCCTTCACCTGGGCTCACTACAAGCAAGCCGCCTATTCCCTCCGCCTCGGCCACTCTCGCCTCGATCTCTTCCGTGCAAAACATCCCCTCCTTCTATAG 984 0.5447 MVVPSSNSMRTKKTNAVRIPTVDLSLERSELLELVIKACEQYGFFKAVNHGVPEEVISRLENEGIEFFSKSTSEKRQAGPAAPFGYGCRNIGPNGDMGDLEYLLLHTNPLSISDRSKTISNDPNNFSCAVNDYIEAVRELACEVVELVAEGLWVPDKYAVSKLIRDAHSDSVLRINHYPPTKSSSKWEPSIGFGEHSDPQILTILRSNEVGGLQICTQEGLWIPVAPDPTEFFVMVGDALQVMTNGRLRSVRHRVMRSTIRKGRVSTMYFAAPPPSSWITPLPKMVSAQRPSEYRPFTWAHYKQAAYSLRLGHSRLDLFRAKHPLLL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4138 327 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 168 273 IPR005123 -
Prci1g4138 327 Gene3D - 2 310 IPR027443 -
Prci1g4138 327 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 304 - -
Prci1g4138 327 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 81 IPR026992 -
Prci1g4138 327 SUPERFAMILY Clavaminate synthase-like 11 312 - -
Prci1g4138 327 FunFam Gibberellin 2-beta-dioxygenase 2 3 310 - -
Prci1g4138 327 Pfam 2OG-Fe(II) oxygenase superfamily 170 272 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4138 Prci-Chr1 56350204 56353373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4138 10 320 Glycosyltransferase AT5G59530 27.864 5.84e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4138 K04125 - gmx:100809097 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4138 1 56350204 56353373 Prci3g3584 3 45406937 45409604 CCT
Prci1g4138 1 56350204 56353373 Prci1g4138 1 56350204 56353373 ECH