Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3535 ATGCTACAACCCTACCGCATGACGATGGCCGTCGCTGCTACCACCTCTCTCAATGCTTCTGAAAAGAAGCACTGGTGGATCACGAACCGTAAGATTGTTGAGAAATATATCAAAGACGCTCGCAGCCTCATTGCGACCCAAGAACAGAGCGAGATCGCCTCGGCTCTGAACCTCGTGGACGCGGCGCTGGCCATATCTCCACGCCTGGACCAGGCTCTCGAGCTCAGAGCCAGGTCTCTTCTTTATCTCCGGCGTTTCAAGGACGTCGCCGATATGCTTCAGGACTACATTCCCAGCCTCAGAATGGCTGTCGAGGACTCGGGCTCTTGTTCTTCCGATAGTTCGTCGCAGCAGCTCTCGAGGGAGGGAGTCAAGCTGCTGTCGTCTTCAGAGTCGTCGCCGGATCAGAGTTTCAAGTGCTTCTCCGTCTCGGACTTAAAGAAGAAAGTGATGGCAGGACTGTGTAAAAGTGGCGAGAAGGGAGGGCAATGGAGATACTTGGTGCTGGGTCAAGCATGTTGTCATCTTGGTCTGATGGAGGATGCGATGGTGCTTCTCCAAACTGGGAAACGACTTGCTAGCGCCGCCTTCCGCCGCGAAAGCGTTTGCTGGTCCGACGACAGCTTCTCTTTAACAAACATCCCCTTCTCCTGTGACGTAACCAACACCGCACCATCCACTCCACCTCGGACACCTCTGACCGAATTCGAGACCGTCACTCAACTCCTCAGTCACATCAAGCTCCTCCTCCGCCGTCGCACTGCGGCACTCGCCGCCCTCGACGCCGGCCTCTATTCTGAGGCCATCCGCCACTTCTCCAAAATCGTCGATGGCCGCCGTGGCGCTCCGCAAGCCTTCCTCGCCGAATGCTATATGCACCGAGCCTCTTCCTACCGTTCCGCAGGCAGAATCGCGGAGTCTATTGCAGATTGTAATCGTACACTGGCTTTGGACCCCACTTGCATTCAAGCTCTTGATACGAGAGCCGCCCTTCTAGAATCCATTCGATGCCTGCCTGATTGCCTTCATGATCTTGAACACTTGAAGCTTTTGTACAACACAATCTTGCGGGATCGCAAGCTTCCTGGCCCTGCTTGGAAGCGTCATAACGTTAGGTACAGAGAGATTCCTGGGAAACTCTGCGCTCTCACGACGAAAATTCAAGAACTGAAGCAAAGGGTGGCTTCAGGGGAGACCGGTAATGTGGATTACTACGCTTTGATTGGACTGCCGCGCGGTTGCTCACGATCGGAGTTGGAGAGGGCTCATTTGTTACTCTGTTTAAGGCACAAACCAGATAAAGCTACCAGCTTTATTGATCGCTGCGAGCTTGCGAACGAACGTGATCTTGAATCGGTGAAGGAGAGATCAAAAATGTCAGCATTGTTATTGTACAGATTGATTCAGAAAGGTTACGCAAGCGTGATGGCTACGATCATGGATGAAGAAGCCGCCAAGAAGCAGAGGAAGAAGGCTGCTGCTGCTGCTGCTGCTTTGCAAGCTGCACAAGCAGCAATACAGGTTCCCGAAAAAAGTGGGTGCAGAACGGAATACGAGGGAAAGAAATCAGAGAAAACAGTTTCTTCGTCGACTGTAAATCCTTCTGTATTCCAGGGGGTGTTTTGCCGTGATCTTGCCGTTGTTGGGAGCTTACTTTCTCAAGTTGGATTCAACCGTTCTATTCCAGTGAAGTATGAGGCGCTAAGCTGCTGA 1713 0.5242 MLQPYRMTMAVAATTSLNASEKKHWWITNRKIVEKYIKDARSLIATQEQSEIASALNLVDAALAISPRLDQALELRARSLLYLRRFKDVADMLQDYIPSLRMAVEDSGSCSSDSSSQQLSREGVKLLSSSESSPDQSFKCFSVSDLKKKVMAGLCKSGEKGGQWRYLVLGQACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWSDDSFSLTNIPFSCDVTNTAPSTPPRTPLTEFETVTQLLSHIKLLLRRRTAALAALDAGLYSEAIRHFSKIVDGRRGAPQAFLAECYMHRASSYRSAGRIAESIADCNRTLALDPTCIQALDTRAALLESIRCLPDCLHDLEHLKLLYNTILRDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKQRVASGETGNVDYYALIGLPRGCSRSELERAHLLLCLRHKPDKATSFIDRCELANERDLESVKERSKMSALLLYRLIQKGYASVMATIMDEEAAKKQRKKAAAAAAALQAAQAAIQVPEKSGCRTEYEGKKSEKTVSSSTVNPSVFQGVFCRDLAVVGSLLSQVGFNRSIPVKYEALSC 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3535 570 SMART tpr_5 288 321 IPR019734 GO:0005515
Prci3g3535 570 SUPERFAMILY Chaperone J-domain 399 437 IPR036869 -
Prci3g3535 570 Gene3D DnaJ domain 388 538 IPR036869 -
Prci3g3535 570 PANTHER OS01G0273500 PROTEIN 12 570 - -
Prci3g3535 570 CDD DnaJ 403 437 IPR001623 -
Prci3g3535 570 SMART dnaj_3 402 484 IPR001623 -
Prci3g3535 570 Gene3D Tetratricopeptide repeat domain 238 361 IPR011990 GO:0005515
Prci3g3535 570 SUPERFAMILY TPR-like 255 349 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3535 Prci-Chr3 45119140 45122690 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3535 - - gmx:100808420 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4099 1 56012871 56015735 Prci3g3535 3 45119140 45122690 CCT
Prci3g3535 3 45119140 45122690 Prci3g3535 3 45119140 45122690 ECH