Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4099 ATGGCCGTCGCTACTCCCTCCCCCAACGCTTCCGACAAGAAGCACTGGTGGCTTACCAACCGTAAGATTGTTGAGAAACACATTAGAGATGCTCGCGCCCTGATTGCCACCCAACAGCAGAGCGAAATCGCTTCGGCTCTGAACCTTCTAGACGCGGCTCTGGCCATCTATCCGCGCCTAGACAAAGCCCTGGAACTCAAAGCCAGGTCTCTTCTGTTTCTGCGGCGGTTCAAGGAGGTGGCCGATATGCTTCAAGACGACATTCCGAGCCTCAAAATGACCAGCGAAGACTCGGCCTCCTTTTCTACTGATAATTCGTCGCAACAGTTTTCCAGGGAGGGGTTGATGCTCCTTTCATCCTCATCCGAGTTGTCGGGTCGGGATCAGAGTTTCAAATGCTTCTCTGTATCGGACTTGAAGAAGAAAGTCATGGCAGGACTGTTCAAAAGCTGCGACAAAAAAGCGCAGTGGAGGTACTTAATTCTGGGCAAAGCATGCTGCCATCTAGGTCTAATGGAGGATGCAATGGTTCTTCTACAAACAGGTAAACGCATTGCCAGTGACGCCTTCCGCCGCGAAAGCGTTTGCTGGTCTGAAGACAGCTTCTTCTTAACAGCAATCACCTTCTCCGGGGACGCCTCCAACCCAACACCCTCCACTCCTCACAAAACACCTCTCACCGAGTTCGAAGGCATCACCCAACTCCTCAGCCACATCAAGCTCCTCCTCCGACGTCGCACGGCGGCACTAGCCGCCCTCGATGCTGGTCTCTACTCTGAAGCCATTCGACACTTTTCCAAAATCGTTGAAGGCCGCCGCAACGTGCCGCAAGGTTTTCTCGCCGAGTGTTATATGCTCAGAGCCTCCTCCTACCGCTCTGCCGGTCGAATTGCAGAGTCCATTGCTGACTGTAATCGGACTCTGGCGCTCGACCCGTCTTGCATTCAAGCTCTCGATACCAGAGCCTCCCTCCTGGAAACAATTCGATGCTTGCCGGATTGCTTGCACGACCTTGAACACTTGAAACTTCTGTATAATTCGATCCTGCGGGATAGAAAGCTTCCAGGTCCTGCTTGGAAGCGTCACAATGTGAGGTACAGAGAAATTCCTGGGAAACTCTGCACTCTCACCACTAAAATCCAAGAACTGAAACGAAGAGTGGCTTCTGGAGAAACTAACAACGTGGATTACTATGCTCTGATTGGGTTGCCACGTGGGTGTTCTCGTTCGGAGCTGGAGAGAGCTCATGTATTGCTTTGCTTACGACACAAGCCTGATAAAGCTTTCAACTTTATTGATCGGTGCGAGCTAGCGGACGAACGTGATCTTGAATCAGTTAAGGAAAGAGCTAAAATGTCAGCTTTGTTACTTTATAGATTGCTTCAGAAGGGGTACACAAGTATAATGGCTATGATCATGGATGAGGAAGCAGCTGAAAAACAGAGAAAGAAAGCAGCTGCTGCATTACAAGCCGCACAAGCAGCTGAGTGCAGAGGAGAGTCTAATTTGAATGTCTCAGAGAAATTGTGCGGCAACAGGAATAATTGTTCAGTGGAAAATAAACCCGCATCAGTATCTTCTTCGATTGCGAATTCGTCGGTTTTCCAAGGTGTATTTTGCCGTGATCTTGCTGCTGTTGGGAATTTGCTTTCGCAGGCTGGATTTAACAATCCAATTCCGGTGAAGTACGAGGCACTGAGCTGCTGA 1707 0.4991 MAVATPSPNASDKKHWWLTNRKIVEKHIRDARALIATQQQSEIASALNLLDAALAIYPRLDKALELKARSLLFLRRFKEVADMLQDDIPSLKMTSEDSASFSTDNSSQQFSREGLMLLSSSSELSGRDQSFKCFSVSDLKKKVMAGLFKSCDKKAQWRYLILGKACCHLGLMEDAMVLLQTGKRIASDAFRRESVCWSEDSFFLTAITFSGDASNPTPSTPHKTPLTEFEGITQLLSHIKLLLRRRTAALAALDAGLYSEAIRHFSKIVEGRRNVPQGFLAECYMLRASSYRSAGRIAESIADCNRTLALDPSCIQALDTRASLLETIRCLPDCLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCTLTTKIQELKRRVASGETNNVDYYALIGLPRGCSRSELERAHVLLCLRHKPDKAFNFIDRCELADERDLESVKERAKMSALLLYRLLQKGYTSIMAMIMDEEAAEKQRKKAAAALQAAQAAECRGESNLNVSEKLCGNRNNCSVENKPASVSSSIANSSVFQGVFCRDLAAVGNLLSQAGFNNPIPVKYEALSC 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4099 568 Gene3D Tetratricopeptide repeat domain 237 354 IPR011990 GO:0005515
Prci1g4099 568 SUPERFAMILY Chaperone J-domain 392 430 IPR036869 -
Prci1g4099 568 SMART tpr_5 281 314 IPR019734 GO:0005515
Prci1g4099 568 SUPERFAMILY TPR-like 248 342 IPR011990 GO:0005515
Prci1g4099 568 Coils Coil 475 498 - -
Prci1g4099 568 Gene3D DnaJ domain 381 511 IPR036869 -
Prci1g4099 568 CDD DnaJ 396 428 IPR001623 -
Prci1g4099 568 PANTHER OS01G0273500 PROTEIN 10 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4099 Prci-Chr1 56012871 56015735 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4099 - - qsa:O6P43_010847 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4099 1 56012871 56015735 Prci3g3535 3 45119140 45122690 CCT
Prci1g4099 1 56012871 56015735 Prci1g4099 1 56012871 56015735 ECH