Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3402 ATGGGAGTTGTTACTGTAGGTGAATTAAAGACCAGTATATCTGGGAAGAGATCCTTTCGGACAAGTTCAAGCATAAGGCATGCCACTGAATGGCCAATATCTGATGTCACTAGTGACCTTACCATCGAAGTCGGAGCATCAATTTTTGCACTTCACAAGTTTCCTCTTGTTTCTCGGAGTGGAAGAATTCGAAGACTACTGTCAGAAGCCAAAGATTCGAAAGTTCCACGCATAAGTCTTGCGGCTATACCAGGTGGAGCAATGGCATTTGAGCTAGCCGCCAAATTTTGTTATGGACTCAATGTTGAGTTCACCCTCTCAAATATTGCCATGCTTCGTTGTTTAGCCCATTTTTTGGAAATGACAGAAGAGTTTTTGGAGAAGAACTTGGAGAGCCAAGTTGAAACATATTTGAAGGACACGGTGCTCCCCAGTATACCAAACACAATAACTGTTCTTCATTGTTGCGAAAGTCTTCTTCCCATCTCAGAAGACATAAACCTTGTTAGCAGGCTAATTAATGCAATTGCAAATAATGCATGCAAAGAGCAGCTCACCTCCGGCTTGCTTAAACTTGACCACAACTTTCCCTCCAAGACTATGTCAAACATGGAGCCAGAAACGCCTTCAGATTGGTGGGGAAATTGCCTCAATGTTCTTGGTCTTAATTTCTTCCAACGGGTTGTGTCTGCAGTGAAGTCTAAGGGACTGAAACAGGACATGATTAGCAAAATTCTGATAAGCTATGCACATAATTCCCTCCAGGGCATTGTTGTTAGGGACTCTCAAGGTGTTAAAGGAAGTTCACAGGATTTAGAATTGCAAAAGAAACAAAAGGTCATTATTGAAGCCATAGTTAGCTTACTGCCTACCCAATCAAGGAAAAGCCAAGTTCCGATGGCATTTCTTTCAAGTTTGTTGAAAGCTGCAATAGAGTCATCGGTATCTATTTCCACCAGATCTGATTTGGAAAGGCGGATTGGTCTCCAACTCGACCAGGCAATTCTTGAAGACATCTTAATCCCATCAAATTCACATCAAAACCCCCACGGCACAATCTATGACATAGATTCAATACTGAGAATTTTCTCTATTTTTCTGAACTTGGACGAGGATGACAATGAAGACAGTGACTTGAGATATGAAAGTGAAATGGTGTATGACTTTGACAGTCCTGGATCTCCAAAACAAAGCTCAATTCTCAAGGTATCCAAGTTGCTGGACAATTTTCTTTCTGAAGTAGCATTAGACCCAAACATTGTGCCATCAAAATTCATAGCACTAGCAGAATTACTTCCAGATCATGCACGTATTGTAAGCGACGGACTCTACAGAGCTGTTGATATCTTCCTTAAGGTTCATCCAAACATGAAGGAGTCAGAGAAGCACAGGCTATGCAAAACAGTAGATTGTCAGAAGCTGAGTGAAGAAGCAGGTGGCCACGCGGCACAGAATGAAAGGCTGCCAGTGCAGATGGCGGTGCAAGTTCTGTACTTTGAGCAAATAAGGCTTCGGAACGCTATGAATGGTGGGGGGCACAACCAATTGTTCTTCGGTGGAATGAACGTTCAGTTTCCTCAGCGCTCGGGAAGTGGTGCGGGAAGTGGAGCCATTTCTCCAAGAGATAACTATGCGTCCGTTAGAAGAGAGAACAGGGAGCTGAAGCTGGAGGTTGCAAGAATGAGAATGAGGCTCACTGATCTGGAGAAGGATCACTTTCATATGAAGCAGGAGTTTGTGAGGTCTAGTCCCGCCAACAAGTTCTTTAAATCTTTCACTCACAAACTCAGCAAGCTTAATTCCCTGTTTCGGATTAACAGCATTAAGTCTATTCGGGGCAGAGTTGGTTCGGAAGGTCGCTTCCCTTTTCCAAGGCGTAGGCGTCACTCAGTTTCATGA 1899 0.4339 MGVVTVGELKTSISGKRSFRTSSSIRHATEWPISDVTSDLTIEVGASIFALHKFPLVSRSGRIRRLLSEAKDSKVPRISLAAIPGGAMAFELAAKFCYGLNVEFTLSNIAMLRCLAHFLEMTEEFLEKNLESQVETYLKDTVLPSIPNTITVLHCCESLLPISEDINLVSRLINAIANNACKEQLTSGLLKLDHNFPSKTMSNMEPETPSDWWGNCLNVLGLNFFQRVVSAVKSKGLKQDMISKILISYAHNSLQGIVVRDSQGVKGSSQDLELQKKQKVIIEAIVSLLPTQSRKSQVPMAFLSSLLKAAIESSVSISTRSDLERRIGLQLDQAILEDILIPSNSHQNPHGTIYDIDSILRIFSIFLNLDEDDNEDSDLRYESEMVYDFDSPGSPKQSSILKVSKLLDNFLSEVALDPNIVPSKFIALAELLPDHARIVSDGLYRAVDIFLKVHPNMKESEKHRLCKTVDCQKLSEEAGGHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGGHNQLFFGGMNVQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHFHMKQEFVRSSPANKFFKSFTHKLSKLNSLFRINSIKSIRGRVGSEGRFPFPRRRRHSVS 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3402 632 Coils Coil 544 571 - -
Prci3g3402 632 PANTHER OS12G0117600 PROTEIN 34 577 IPR043454 -
Prci3g3402 632 Gene3D Potassium Channel Kv1.1; Chain A 21 143 IPR011333 -
Prci3g3402 632 ProSiteProfiles NPH3 domain profile. 211 503 IPR027356 -
Prci3g3402 632 Pfam NPH3 family 211 478 IPR027356 -
Prci3g3402 632 SUPERFAMILY POZ domain 25 123 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3402 Prci-Chr3 44456284 44459899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3402 1 453 EF-hand Containing Proteins AT2G47860 59.175 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3402 - - tcc:18613491 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2200 1 42743091 42746888 Prci3g3402 3 44456284 44459899 CCT
Prci3g3402 3 44456284 44459899 Prci3g3402 3 44456284 44459899 ECH