Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2200 ATGGGCGTCGTTACAGTTGCTGAATTGAAGCCTAGTATTTCAGGGAAGAGGTCCTTTCGTCCAAATTCAAGCATAAGGCATGCCACTGAATGGCCAATCTCTGATGTCTCTAGCGACCTCACCATTGAAGTTGGAACATCAAGCTTTGCACTCCACAAGTTTCCTCTAGTTTCTAGAAGTGGAAAAATTCGGAAACTGTTGTTAGAAGCAAAGGATTCAAAGGTTTCGCGGATAAGTCTCCCAATTGTGCCAGGTGGAGCGGAGGCGTTTGAGCTTGCTGCTAAGTTCTGCTATGGAATTAATGTCGAGTTCACTCTCTCAAACATCGCTATGCTACGTTGTGTTGCCCTTTTTCTGGAAATGACTGAAGAATATGCTGAGAAAAACTTGGAGACTCGAGCTGAAGCATATCTAAAGGAGACAGTGCTGCCAAACATTTCAAGCTCAATATCTGTTCTTCATCGTTGTGAAGTACTTTTGCCTATATCGGAAGAGATCAACCTTGTTAGCAGGTTAATCAATGCAATAGCAAATAATGCCTGCAAAGAGCAGCTCACCTCTGGCTTGCTAAAACTTGACCACAATTTTCCTTCTAAAACCATCTCAAGCATGGAACCAGAAACACCCTCAGATTGGTGGGGAAAATCTCTCAATGCTCTTAACCTCGATTTCTTCCAACGAGTCCTTTCTGCAATGAAATCAAAGGGACTAAAACAGGACATGATCAGCAAGATTCTGATAAACTATGCACATAATTCTCTTCAGGGGATTATTGTTAGGGACCCTAAAGTGGTGAAAGGAAGTTCATTGGACTTGGAATTGCAGAAGAAACAAAGGGTCATTGTTGAAGCCATAGTTGGTTTACTTCCAACTCAGTCAAGGAAGAGTCCAGTTCCGATGGCATTTCTATCAAGTTTGCTGAAAGCTGCAATAGCAGCATCAGCATCTACTTCTTGTAGGTCTGATCTGGAGAGGAGGATGGGTCTTCAACTTGATCAGGCCATTCTTGAAGACATCCTAATTCCTGCCACCTCAAGTTTGAATTCCCACTGTACAATGTATGACACTGATTCAATTCTGAGGATCTTTTCCATTTTTCTAAACTTGGATGAGGAAGACGAGGATGATAGTCACTTGAGAGATGAGAGTGAGATGGTATATGACTTTTATAGCCCCGGATCTCCAAAACAAAGCTCAATTCTGAAGGTGTCCAAGTTGTTAGACAATTATCTTGCTGAAATAGCATTAGACTCAAATTTATTGCCGTCGAAGTTCATAGCACTAGCAGAATTACTCCCAGATCATGCGCGTATTGTAAGCGATGGACTCTATAGAGCTGTTGATATCTTCCTAAAGGTTCATCCAAACATGAAAGACTCAGAGCGCTACCGGCTTTGCAAAACCATTGACTGCCAAAAACTGTCCCAAGAAGCTTGCAGCCATGCAGCTCAGAATGAAAGGCTTCCAGTGCAAATGGCAGTCCAAGTTTTGTACTTTGAGCAAATAAGGCTAAGAAACGCCATGAATGGGGGACACAACCAGTTATTCTTTGCAGGTTTCAATGGTCAGTTTCCTCAACGTTCAGGAAGTGGTGCTGCAAGTGGAGCCATTTCCCCAAGAGATAACTATGCATCAGTGAGAAGAGAGAACAGAGAGCTGAAGCTTGAAGTTGCAAGAATGAGAATGAGACTGACTGACTTGGAGAAAGATCACGTGTCCATGAAGCAAGAGCTTGTGAGGTCTCATCCTGCCAATAAGCTATTCAAGTCATTTACAAAAAAGCTTAGCAAGCTCAATGCGTTGTTTCGGATGAACAATATTAAGCCGATTGGAGCGAAAGCTAGCGCTGACAATCGATTTCCTTTTCAAAAGAGAAGGCGTCACTCAGTTTCATGA 1896 0.4262 MGVVTVAELKPSISGKRSFRPNSSIRHATEWPISDVSSDLTIEVGTSSFALHKFPLVSRSGKIRKLLLEAKDSKVSRISLPIVPGGAEAFELAAKFCYGINVEFTLSNIAMLRCVALFLEMTEEYAEKNLETRAEAYLKETVLPNISSSISVLHRCEVLLPISEEINLVSRLINAIANNACKEQLTSGLLKLDHNFPSKTISSMEPETPSDWWGKSLNALNLDFFQRVLSAMKSKGLKQDMISKILINYAHNSLQGIIVRDPKVVKGSSLDLELQKKQRVIVEAIVGLLPTQSRKSPVPMAFLSSLLKAAIAASASTSCRSDLERRMGLQLDQAILEDILIPATSSLNSHCTMYDTDSILRIFSIFLNLDEEDEDDSHLRDESEMVYDFYSPGSPKQSSILKVSKLLDNYLAEIALDSNLLPSKFIALAELLPDHARIVSDGLYRAVDIFLKVHPNMKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGHNQLFFAGFNGQFPQRSGSGAASGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVRSHPANKLFKSFTKKLSKLNALFRMNNIKPIGAKASADNRFPFQKRRRHSVS 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2200 631 Pfam NPH3 family 211 479 IPR027356 -
Prci1g2200 631 PANTHER OS12G0117600 PROTEIN 34 588 IPR043454 -
Prci1g2200 631 Coils Coil 543 577 - -
Prci1g2200 631 FunFam BTB/POZ domain-containing protein At1g03010 16 134 - -
Prci1g2200 631 Pfam BTB/POZ domain 37 139 IPR000210 GO:0005515
Prci1g2200 631 Gene3D Potassium Channel Kv1.1; Chain A 26 148 IPR011333 -
Prci1g2200 631 ProSiteProfiles NPH3 domain profile. 211 503 IPR027356 -
Prci1g2200 631 SUPERFAMILY POZ domain 25 123 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2200 Prci-Chr1 42743091 42746888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2200 1 453 EF-hand Containing Proteins AT2G47860 61.649 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2200 - - zju:107426026 1066.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2200 1 42743091 42746888 Prci3g3402 3 44456284 44459899 CCT
Prci1g2200 1 42743091 42746888 Prci1g2200 1 42743091 42746888 ECH