Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3372 ATGACCCAGCAAGACAAAGACCACACCAACTCCCTCGTCCCCTTCCTGTTAAGCGCTTTGAGAAAATCAATGGTGTCATGTCGGATGCAACCACCCGACGATGTGATCTCCGCCGTCCCTCATGACTTCGAAACCGGATGGCCCACCAACGTTCAGCACATCACTCACGTCACTTTCGATCGCTTCAATGGCTTCCTGGGTCTGCCTGTCGAGTTCCAGCTCGAAATTCCGGGTCGGGTTCCCAGCGCCAGTAAAAGTGTGTTTGGCGTCTCAGCTGAATCAATGCAGTGCTCTTATGATTCAAAGGGGAATAGTATCCCCACTATTTTGTTGCTAATGCAGGAGCGTCTGTACTCACAGGGAGGCCTGAAGGCGGAAGGAATTTTTCGCATAAACCCAGAGAACAGTGAAGAGGAGAATGTGAGGGAGCAGTTGAATAGGGGGATTGTGCCCGACGACATCGATGTGCACTGCTTGGCAGGCCTAATCAAGGCCTGGTTCCGGGAGCTTCCTTCCGGAATTCTTGATGGACTTTCTCCAGAGCAAGTTCTTCACTGCAACACAGAAGAAGAATACGTTGAACTTGTGAAGCGACTAAAGCCCACAGAAGCTGCCCTGCTCACCTGGGCTGTTGATCTCATGGCTGATGTTGTTGAGCACGAAGAACACAACAAAATGAACGCGAGAAATGTTGCCATGGTTTTCGCTCCGAACATGACTCAGATGTCCGATCCATTAACTGCTCTGATGCATGCGGTCCAAGTGATGAACTTGCTCATGACTCTTATAATGAAGACACTCACAGAACGAGAAGATGCCGCGGCATGTTCGCCCACGTCGTTTCATTCATCTGAGGATGAATATGAAAGTGGGGAAGAAATGGATACTAGTAATGACGAAGGGGAAGGGGACGAGGAAGAAGAGCAAGAGCAAGAGGAAGCCGAACCTTCATGTGAGAGAGAAAAATATGCTATGTCGTTTACTGAAAGCGAAACCGGGCAATCCTGTTCCAGTTCTTCATGCGAAGAAAAGTCCGTGAGATCTAGTGTTGACACAAGCAGTCCACCGATAAAATGTGCAGGCACTAGTAACGTGGAGATAACTGCTAAATTAACGGACCCTTCCCCTGGTGCCACTGTCTGCATCTAA 1149 0.4926 MTQQDKDHTNSLVPFLLSALRKSMVSCRMQPPDDVISAVPHDFETGWPTNVQHITHVTFDRFNGFLGLPVEFQLEIPGRVPSASKSVFGVSAESMQCSYDSKGNSIPTILLLMQERLYSQGGLKAEGIFRINPENSEEENVREQLNRGIVPDDIDVHCLAGLIKAWFRELPSGILDGLSPEQVLHCNTEEEYVELVKRLKPTEAALLTWAVDLMADVVEHEEHNKMNARNVAMVFAPNMTQMSDPLTALMHAVQVMNLLMTLIMKTLTEREDAAACSPTSFHSSEDEYESGEEMDTSNDEGEGDEEEEQEQEEAEPSCEREKYAMSFTESETGQSCSSSSCEEKSVRSSVDTSSPPIKCAGTSNVEITAKLTDPSPGATVCI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3372 382 ProSiteProfiles Rho GTPase-activating proteins domain profile. 90 271 IPR000198 GO:0007165
Prci3g3372 382 Gene3D CRIB domain 41 76 IPR036936 -
Prci3g3372 382 FunFam Rho GTPase-activating protein 5 75 268 - -
Prci3g3372 382 Gene3D Rho GTPase activation protein 77 281 IPR008936 -
Prci3g3372 382 SMART PBD_5 45 79 IPR000095 -
Prci3g3372 382 MobiDBLite consensus disorder prediction 327 360 - -
Prci3g3372 382 MobiDBLite consensus disorder prediction 274 360 - -
Prci3g3372 382 SMART RhoGAP_3 104 267 IPR000198 GO:0007165
Prci3g3372 382 CDD RhoGAP 107 265 - -
Prci3g3372 382 MobiDBLite consensus disorder prediction 288 314 - -
Prci3g3372 382 PANTHER MKIAA1688 PROTEIN 4 348 IPR044785 GO:0005096
Prci3g3372 382 SUPERFAMILY GTPase activation domain, GAP 84 264 IPR008936 -
Prci3g3372 382 Pfam RhoGAP domain 107 241 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3372 Prci-Chr3 44347111 44349699 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3372 - - gmx:100807134 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2245 1 43040167 43043014 Prci3g3372 3 44347111 44349699 CCT
Prci3g3372 3 44347111 44349699 Prci3g3372 3 44347111 44349699 ECH