Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2245 ATGACGGGGCTCGTGATGGTGACGAAGGGCGGAGGGTGCGGCGGAGGGAAGGGAGCCAAGAGAGGAAGAACTGCCACCGAAGAAGAGCAGAACCAGCTGTCCCTCGTCGCATTCCTTCTGGCGGCTCTGAGGAAGTCCATGGTGGCGTGTCGGGTGGATCGACCCGACGAGGTTATCCCCTCTGTTCATCACATGGAAATAGGTTGGCCCACCGATGTTCAGCACATCACTCATGTCACTTTCGATCGCTTCAATGGTTTTCTGGGTCTTCCCGTTGAGTTCGAGATCGAGATCCCGGGTCGGGTTCCCAGCGCTAGTGTAAGTGTGTTTGGCGTGTCAGCAGATTCTATGCAGTGTTCTTATGATTCAAAAGGAAACAGTGTGCCCACTATTCTCTTACATATGCAGGAGCGTTTATACTCACAGGGAGGCCTAAAGCGGGAAGGAATATTTCGCATAAACCCAGAAAATAGTCAAGAAGAACATGTGAGAGACCAGTTGAATCGGGGGATTGTGCCGGATGACATTGATGTCCACTGTTTGGCGGGCTTAATTAAAGCCTGGTTTCGAGAGCTTCCTTCAGGAGTACTGGATGGACTTTCACCTGAACAGGTTCTTCAGTGCAACACAGAAGAAGAATCTGTTGAGCTCGTGAAACAGCTCAAACCAACTGAGGCTGCCTTGCTCAACTGGGCTATTGATCTCATGGCTGATGTTGTAGAGGAGGAAGAATTCAACAAAATGAATGCAAGAAATATTGCAATGGTCTTTGCTCCAAACATGACGCAGATGTCTGATCCATTAACTGCTCTGATGCACGCGGTCCAAGTGATGAACTTGCTGAAGACCTTGATAATGAAAGCACTTAGAGAGCGTGAAGAAACAACAACAGGAGGATATTCACCCATGTCATTCCGTTCATCAGAGCGCCAGTCTGAGGATGGATATGACAGCCAGCAAGAAATGGAGACCAGCGGAGAATTAAGAGGAACCAAGTCAGATTATGATGAACATGCTCACTACAGCCACAGCAGCGAAGAAGAAGAAGGTGGTGCCGAATCTTTAAGTGACATAGAGGAATGCTTCTTGAAGCAGTTGGATGAGCACCCAAAAGAATACTCAGAAGAACCTGCAGGAGATGTGCTGGAGGACTGTGCTAGCCCCATAAGTCACTCTGGCAGTAACATAGGAACTGCTATGTCATTTAGTGATACCAAAACCGAGAATTCTTGCTTGAGTTGCTTTCATGGTGAAAAATCAAGGACAACCCAGACTGCCGGGGGATCAAAAGTTACAAACAGTCCATCACTAGGATGTACAGGCAGCAATGATGTGGAGATTATGGTTACATTTACAGGTTCTGTTTCACCTGTGCCAATGTTTACCTCCAATTAG 1395 0.4774 MTGLVMVTKGGGCGGGKGAKRGRTATEEEQNQLSLVAFLLAALRKSMVACRVDRPDEVIPSVHHMEIGWPTDVQHITHVTFDRFNGFLGLPVEFEIEIPGRVPSASVSVFGVSADSMQCSYDSKGNSVPTILLHMQERLYSQGGLKREGIFRINPENSQEEHVRDQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESVELVKQLKPTEAALLNWAIDLMADVVEEEEFNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKALREREETTTGGYSPMSFRSSERQSEDGYDSQQEMETSGELRGTKSDYDEHAHYSHSSEEEEGGAESLSDIEECFLKQLDEHPKEYSEEPAGDVLEDCASPISHSGSNIGTAMSFSDTKTENSCLSCFHGEKSRTTQTAGGSKVTNSPSLGCTGSNDVEIMVTFTGSVSPVPMFTSN 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2245 464 SUPERFAMILY GTPase activation domain, GAP 108 286 IPR008936 -
Prci1g2245 464 CDD CRIB 65 105 - -
Prci1g2245 464 FunFam Rho GTPase-activating protein 5 97 290 - -
Prci1g2245 464 PANTHER MKIAA1688 PROTEIN 26 424 IPR044785 GO:0005096
Prci1g2245 464 Pfam RhoGAP domain 129 263 IPR000198 GO:0007165
Prci1g2245 464 Gene3D CRIB domain 61 98 IPR036936 -
Prci1g2245 464 MobiDBLite consensus disorder prediction 327 350 - -
Prci1g2245 464 MobiDBLite consensus disorder prediction 420 439 - -
Prci1g2245 464 Gene3D Rho GTPase activation protein 99 291 IPR008936 -
Prci1g2245 464 SMART PBD_5 67 101 IPR000095 -
Prci1g2245 464 CDD RhoGAP 129 285 - -
Prci1g2245 464 SMART RhoGAP_3 126 289 IPR000198 GO:0007165
Prci1g2245 464 ProSiteProfiles Rho GTPase-activating proteins domain profile. 112 292 IPR000198 GO:0007165
Prci1g2245 464 MobiDBLite consensus disorder prediction 293 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2245 Prci-Chr1 43040167 43043014 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2245 - - gmx:100807134 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2245 1 43040167 43043014 Prci3g3372 3 44347111 44349699 CCT
Prci1g2245 1 43040167 43043014 Prci1g2245 1 43040167 43043014 ECH