Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3362 ATGGCCAATCAAAGGGTACCCTGGTGTGGCATTGGCTTGTACATTCTGCTTTTTGCGTGTTTGATACGGATACAAAGTCCTTCATATGTGCATGCCATTTTGGACCCCGTTGATTTCTTGGCTCTGCAATCCATTCGAAAGGCTCTGCAAGACATGCCGGGATCCAATTTCCTTTCTTCTTGGGATTTCACTTCCGACCCATGTAATTTCGCCGGCGTTTACTGTGATTCCGATAAAGTCATCGCTCTCAACCTCGGGGACCCCAGAGCCGGTGCTCCTGGCCTTACCGGCAAACTCGACCCAGCTATCGGCAGGCTGTCTGCTCTCGCCGAGTTCACGGTAGTTCCGGGCAGGATATACGGCTCTCTGCCGCAGACATTATCTAACTTGAAGAGCCTCAGATTCCTCGGCATCAGCCGGAACTTCATTTCAGGCGATATTCCGGGGACCCTGGGTCAGTTGCGCAATCTCAAAACCCTCGACCTCAGCTACAATCAGTTGACCGGAAGCATTCCTCCGTCGATCGGAGCATTACCGGGGTTAAACAATGTGATCCTCTGCCACAACCGCCTCACCGGTTCTGTGCCTAGGTTTTCATCGCAGACGCTGACCCGGATGGACCTGAAGCACAATGCTCTGTCCGGTTCGCTGGCTTCCGATTCTCTCCCCGCCTCCCTCCAATATCTGTCGTTGTCATGGAACCAGTTGAGTGGGCCAGTGGATCGGCTGTTGAACCGGATGGACCAACTGAACTATCTGGATCTCAGCCTGAACAAGTTCTCGGGCATGATTCCGGGTCGGATATTCTCGTTTCCGTTGAACAATTTACAACTAGAAAGGAATGAATTTTGGGGTGCAGTCCAACCGGTTGATCAGGTGAAAATCCCAACCGTTGATCTGAGCTACAACAGGTTGTCGGGCCAGGTGTCGCCCATGTTCTCGACCGTGCAAAATCTATACCTCAACAACAACCGGTTCACGGGTCAGGTTCCGAGTAGCTTCGTGGATCGGTTATTGGATGCGACCATACAGATACTCTACTTGCAGCACAATTTTCTGATGGGAATCGCGATCAGTCCGACGGCTGAGATTCCTCTAAGCAGCTCCTTGTGTCTACAGTACAATTGCATGGTCCCGCCCATAGAGACCACTTGCCCTTTGAAGGCCGGGAAACAGATATCGAGGCCTTCTTCTCAGTGCAGCCAATGGAGGGGTTAA 1218 0.5197 MANQRVPWCGIGLYILLFACLIRIQSPSYVHAILDPVDFLALQSIRKALQDMPGSNFLSSWDFTSDPCNFAGVYCDSDKVIALNLGDPRAGAPGLTGKLDPAIGRLSALAEFTVVPGRIYGSLPQTLSNLKSLRFLGISRNFISGDIPGTLGQLRNLKTLDLSYNQLTGSIPPSIGALPGLNNVILCHNRLTGSVPRFSSQTLTRMDLKHNALSGSLASDSLPASLQYLSLSWNQLSGPVDRLLNRMDQLNYLDLSLNKFSGMIPGRIFSFPLNNLQLERNEFWGAVQPVDQVKIPTVDLSYNRLSGQVSPMFSTVQNLYLNNNRFTGQVPSSFVDRLLDATIQILYLQHNFLMGIAISPTAEIPLSSSLCLQYNCMVPPIETTCPLKAGKQISRPSSQCSQWRG 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3362 405 SUPERFAMILY L domain-like 36 284 - -
Prci3g3362 405 Gene3D Ribonuclease Inhibitor 201 386 IPR032675 -
Prci3g3362 405 Gene3D Ribonuclease Inhibitor 38 200 IPR032675 -
Prci3g3362 405 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 19 405 - -
Prci3g3362 405 FunFam Nuclear pore complex protein NUP107 36 197 - -
Prci3g3362 405 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Prci3g3362 405 Pfam Leucine rich repeat 132 191 IPR001611 GO:0005515
Prci3g3362 405 SUPERFAMILY L domain-like 274 377 - -
Prci3g3362 405 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
Prci3g3362 405 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3362 Prci-Chr3 44270900 44272789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3362 41 355 Receptor kinase-like Gene Family AT5G62230 32.229 1.53e-38 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3362 - - qsa:O6P43_010682 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2255 1 43153669 43155535 Prci3g3362 3 44270900 44272789 CCT
Prci3g3362 3 44270900 44272789 Prci3g3362 3 44270900 44272789 ECH