Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2255 ATGGCGCGGCCGAGGGAGCCGGGATGCAGCGTTGTTTCCTTTATTCTGGTTTTCATGTGTTTGGCGCAGATACATTGTCATTTCCGTGTGCTTGCCATGTTGGACCCTCTTGATTTCCTGGCCCTGCAATCGGTTCGCAAGTCTCTCAAGGATATGCCGGGATCGAATTTCTTTGCCTCCTGGGATTTCACTGCCGACCCGTGTAATTTTGCTGGTGTTTACTGTGATTCCGAGAAGGTTGTCGCCCTCAATCTCGGCGACTCCAGAGCTGGTTCTCCTGGTCTGACAGGCAGGCTCGACCCGGCGATCGGCAAGCTCTCTGCTCTTACCGAGTTCACGGTTGTGCCTGGTAGAATATACGGTTCTATGCCTCAGTCATTCTCGAATTTGAAGAACCTCAGATTCCTTGGCGTCAGCCGGAACTTCATCTCCGGCGAGATTCCAGAGCACTTGGGAAGATTGCGCAATCTCAGAACCCTCGATCTCAGCTACAATCAGCTCACAGGACGCATTCCTCCATCCGTCGGAGCCTTGCCGGAGCTAAACAACTTGATCCTCTGCCACAACCACCTCTCCGGGTCAGTCCCCTCGTTTGCCTCACCCACCCTCACTCGACTTGACCTGAAGCACAACTCTCTCACGGGTTCGCTCGCTCCCAATTCTCTCCCTCCCTCACTCCAATACCTCTCTCTGTCCTGGAACAATCTCAGTGGCCCAGTGGATCGGCTCTTGAACCGGATGAACCAATTGAACTACATGGACCTCAGCCTGAACCGGTTCACAGGCATAATTCCGGCTCGCATCTTTTCATTTCCACTTACCAATCTTCAACTAGAAAGGAACCAATTCACCGGTCCTGTACAACCGGTTAATCAAGTCACAATCCCAACCGTGGATCTCAGTCACAATGAGTTTTCGGGTCCGATATCATCCATGCTCTCGACCGTTGAAAACCTATACCTCAACAACAACCGGTTCACGGGTCGGGTTCCGAGCAACTTCGTAGACCAGCTATTGGCCGCCAGAATACAGATACTATATTTGCAGCACAATTATCTGACCGACATTGAGATCAGTCCAACGGCTGAGATTCCTGTGAGCAGCTCGTTGTGTCTTCAGTACAACTGCATGGTCCCGCCTATACAGACGCCATGCCCCTTGAGGTCTGGGAAACAGATAACGAGGCCTACTGCTCAATGCAACCAATGGAGAGGGTAA 1218 0.5197 MARPREPGCSVVSFILVFMCLAQIHCHFRVLAMLDPLDFLALQSVRKSLKDMPGSNFFASWDFTADPCNFAGVYCDSEKVVALNLGDSRAGSPGLTGRLDPAIGKLSALTEFTVVPGRIYGSMPQSFSNLKNLRFLGVSRNFISGEIPEHLGRLRNLRTLDLSYNQLTGRIPPSVGALPELNNLILCHNHLSGSVPSFASPTLTRLDLKHNSLTGSLAPNSLPPSLQYLSLSWNNLSGPVDRLLNRMNQLNYMDLSLNRFTGIIPARIFSFPLTNLQLERNQFTGPVQPVNQVTIPTVDLSHNEFSGPISSMLSTVENLYLNNNRFTGRVPSNFVDQLLAARIQILYLQHNYLTDIEISPTAEIPVSSSLCLQYNCMVPPIQTPCPLRSGKQITRPTAQCNQWRG 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2255 405 SUPERFAMILY L domain-like 45 383 - -
Prci1g2255 405 Gene3D Ribonuclease Inhibitor 200 384 IPR032675 -
Prci1g2255 405 FunFam Nuclear pore complex protein NUP107 37 197 - -
Prci1g2255 405 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
Prci1g2255 405 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Prci1g2255 405 Gene3D Ribonuclease Inhibitor 38 199 IPR032675 -
Prci1g2255 405 Pfam Leucine Rich repeat 200 215 IPR001611 GO:0005515
Prci1g2255 405 Pfam Leucine Rich repeat 224 238 IPR001611 GO:0005515
Prci1g2255 405 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 17 405 - -
Prci1g2255 405 Pfam Leucine rich repeat 118 167 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2255 Prci-Chr1 43153669 43155535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2255 41 354 Receptor kinase-like Gene Family AT5G62230 32.515 6.92e-40 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2255 - - qsa:O6P43_010682 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2255 1 43153669 43155535 Prci3g3362 3 44270900 44272789 CCT
Prci1g2255 1 43153669 43155535 Prci1g2255 1 43153669 43155535 ECH