Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3344 ATGCCGATGCCGGCTGGGCCAGCATCACCAACCGATCATGCTCCGCCCCTGGGACCTACTATGGTGCCGATGCAATCCACTCCCATTATGGTTTCGGACTCATTTGCTAAAGATGCTATCATTTCTTGGTTCCGCAGCGAATTTGCCGCTGCTAACGCCGTTATTGATGCTCTCTGTGGTCACCTCGCTCAGCTCAGTGCAGCCGCTGGGGCCTCCGATTATGAATCTGTTTTTTCTGCAATTCATCGTCGGAGACTGAACTGGATACCGGTCATTCAAATGCAGAAGTATCACTCAATAGCTGAAGTGGCGGTGGAGCTTCGCAAAGTCGCCGAGAAGAAGACAGAGGCCAAAGAAAAGGGTCGAGATAACAGAAAGAGTGAGGACGCGGACACTTGTTTGGAGGACAAAAAGAAAATCAATCCGAAAATAATGGACAGTGATGGAAATGGCGGTGACGAGGCTCCTGAAGAGTATGATTCACCGGAAAGTGAAATTACCGATTCAGGATCTCAAGAAATGCAAGCCAGTTTGATGAACAGCAGTATATGCTTCAACCACGAAGAATGTGAAGGACGTAATGCCCAGATAAAGTTGACAAAAGGCTTCTCGGCGAAGGAGTCGGTGAAGGGGCACATGGTGAATGTGGTGAAAGGATTGAAGTTATATGAGGACGTTTTCTCTGATTCAGAACTCTGCAAGCTCTATGATTTCGTCAATGAGATCCATTCTGCTGGCCAGAATGGTGAACTCTCAGGCGAGACTTTTATACTATTCAACAAACAGATGAAGGGCAACAAGAGAGAGCTGATTCAACTTGGTGTTCCAATTTTTGGACCGATCAAGGAGGATGCCAAAAGCAATATAGAGCCAATTCCAGCTCTTCTTCGAAGTGTCATTGATCATCTTATTCAGTGGAAACTACTTCCAGAGTACAAAAGGCCAAATAGTTGCATCATCAACTTCTTTGAAGAGGGGGAATATTCTCAGCCATTCCTTAAACCACCTCATCTGGACCAACCTGTGTCTACTCTGCTTCTATCTGAAGCAACCATGGCTTTTGGGCGTACCCTTACCAGCGACAGTGAGGGGAACTACAAGGGGCCACTCATGCTCTCACCGAAGAATGGGTCTCTTATAGTGATGAGAGGGAACAGTGCTGACATGGCAAGGCATGTGATGTGCCCATCCCCAAACAGAAGGGTCAGCATCACCTTTTTCAGGGTAAGGCCGGACTCCAACCAATGCCAAGCACCAAATCCTTCCATGCCAAATACAATGACTCTTTGGCAACCTGGAATAGCCAGCCCATATGCTTTGGCAAATGGAGCTCTCAGTGGCAATGAGGCTGTGGATATGATGCCCAAGTTGGGAATAATTCGTGCCCCAGTGGTCATGTTAACCCCTATGCGCCCTATGGTGTTGAGTTCTCGAAAGCTTCCTCGTGGTGGGACAGGGGTGTTCTTACCCTGGAACGTGCCTTCTAGAAAACATGCCAAGCATCTTCCCCCTCGAGCCCAGAAAGGACGGCTTCTGGCATTGCCTCCCCCAGTTGAGTCTCACACTCACGTGGAAGAGTCCACTTCCGGACCCACCATTACTGTTGAAGAGTAA 1614 0.4839 MPMPAGPASPTDHAPPLGPTMVPMQSTPIMVSDSFAKDAIISWFRSEFAAANAVIDALCGHLAQLSAAAGASDYESVFSAIHRRRLNWIPVIQMQKYHSIAEVAVELRKVAEKKTEAKEKGRDNRKSEDADTCLEDKKKINPKIMDSDGNGGDEAPEEYDSPESEITDSGSQEMQASLMNSSICFNHEECEGRNAQIKLTKGFSAKESVKGHMVNVVKGLKLYEDVFSDSELCKLYDFVNEIHSAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGPIKEDAKSNIEPIPALLRSVIDHLIQWKLLPEYKRPNSCIINFFEEGEYSQPFLKPPHLDQPVSTLLLSEATMAFGRTLTSDSEGNYKGPLMLSPKNGSLIVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQCQAPNPSMPNTMTLWQPGIASPYALANGALSGNEAVDMMPKLGIIRAPVVMLTPMRPMVLSSRKLPRGGTGVFLPWNVPSRKHAKHLPPRAQKGRLLALPPPVESHTHVEESTSGPTITVEE 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3344 537 MobiDBLite consensus disorder prediction 1 21 - -
Prci3g3344 537 MobiDBLite consensus disorder prediction 113 172 - -
Prci3g3344 537 SUPERFAMILY Clavaminate synthase-like 210 410 - -
Prci3g3344 537 Gene3D - 203 418 IPR037151 -
Prci3g3344 537 MobiDBLite consensus disorder prediction 1 17 - -
Prci3g3344 537 MobiDBLite consensus disorder prediction 522 537 - -
Prci3g3344 537 MobiDBLite consensus disorder prediction 516 537 - -
Prci3g3344 537 Coils Coil 100 120 - -
Prci3g3344 537 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 314 411 IPR005123 -
Prci3g3344 537 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 36 512 IPR044842 GO:0003729|GO:0006402|GO:0032451
Prci3g3344 537 MobiDBLite consensus disorder prediction 113 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3344 Prci-Chr3 44177873 44182831 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3344 K10767 - qsa:O6P43_010670 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2266 1 43244680 43250002 Prci3g3344 3 44177873 44182831 CCT
Prci3g3344 3 44177873 44182831 Prci3g3344 3 44177873 44182831 ECH