Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2266 ATGCCGATTGCTAGCGCCCCTGTATCGCCGCCGATCGATCACGTTCTTTCGGCGGGGTCGACAATGCTGCCGATGCAACCACCGCCTATATGTGTTTCTGACTCCTTCGCCAAAGACGCATTCATTTCTTGGATTCGGACCGAGTTTGCGGCTGCAAACGCCATCATCGACACTCTATGTAGTCATCTAGCTCTGCTAGCTAAGCTAGCGGACGCTTCTTCTGACTATGACTCCGTGTTCGATGCAATTCATCGTCGTCGTCATACCTGGGTCCCAATACTGCAGATGCAGAAATATGACTCCATTGCTGACGTGACGTGGGAGCTCCGCAAAGTGGCAGGGAAGAAAACTGGGACTAAGGAAATCGGAGAAGGTGAAAGGAGGAATGAGGATTTAGGGAATCAATTGGATGAAAAAACGAAAATCGAAGAGAAAGGAATGGGAACTAGTGTAAATTCTGAAGGCGACGAATGTCCCGAAGAGTATGATTCGCCTAACAGCGAAATTACTGATTCAGGATGCCAGGAAGTGCAAGGAAGTTTGACAAACATCAACATATGTTCAAAGCATGAAGAATGCCAAGGACGTTCTTCACAGATGACGTTGAGGAAAGGTTTTCAAGCGAAGGAGACAGTGAGGGGCCATATGGTAAATGTTGTGAAGGGATTGAAGCTATACGAGGACATTTTCACCGAACACGAACTCAGCAAGCTCACTGATTTTGTCAATGAGCTTCATGCTGCTGGCAAGAATGGAAAACTCTCTGGGGAAACTTTTATATTATTTAACAAGCAGATGAAGGGGAACAAACGAGAGCTGATTCAGCTGGGAGTGCCAATTTTTGGACAGATAAAGGAGGATGCGAACAGCAATATAGAGCCAATTCCATCTCTCCTCCAAAGTGTCATTGATCACCTTATCCAATGGCGTCTACTTCCCGAATACAGAAGGCCAGATGGTTGTATCATCAACTTTTTTGAAGAGGGGGAATATTCTCAGCCATTCCTGAAACCACCACACCTGGATCAACCTCTGTCCACTCTTCTTCTTTCTGAATCGACTATGGCTTTTGGGCGTACCCTTACGAGCGAAAATGATGGGAACTACAAAGGGCCACTCATGCTCTCACTGAAGAAGGGGTCTCTTCTAGTGATGAGAGGCAACAGTGCTGACATGGCGAGGCACGTCATGTGTCCATCCCCAAACAGAAGGGTCAGCATCACCTTCTTCAGAACGAGGTCAAACTCCAATCAATGTCAATCACCAACTCCTTCAATGGTGATGAGTGCCATGACTTTCTGGAAACCCGGAATTTCTGGTCCATATGCGTTGCCAAGTGTACCTCCCAGTGGACCCGAGGCAATGGGAATGATGCCCCAATGGGGAATCCTGCGAGCTCCACTGGTGATGTTAGCCCCTGTAAGCACTCGAGAATTAGCTGGTGGAGGAGGAACTGGGGTGTTCTTGCCCTGGAATGTGCCATCCAGAAAACCTGCAAAGCATCTTCCACCACGAGCTCAACGAGCTCGACTTCTAGCTTTACCTTCCTCAGTTGAATCACACATCTCAGACTCTTCTTCTGAACCCAGCGTTAGTGCTTAA 1602 0.4775 MPIASAPVSPPIDHVLSAGSTMLPMQPPPICVSDSFAKDAFISWIRTEFAAANAIIDTLCSHLALLAKLADASSDYDSVFDAIHRRRHTWVPILQMQKYDSIADVTWELRKVAGKKTGTKEIGEGERRNEDLGNQLDEKTKIEEKGMGTSVNSEGDECPEEYDSPNSEITDSGCQEVQGSLTNINICSKHEECQGRSSQMTLRKGFQAKETVRGHMVNVVKGLKLYEDIFTEHELSKLTDFVNELHAAGKNGKLSGETFILFNKQMKGNKRELIQLGVPIFGQIKEDANSNIEPIPSLLQSVIDHLIQWRLLPEYRRPDGCIINFFEEGEYSQPFLKPPHLDQPLSTLLLSESTMAFGRTLTSENDGNYKGPLMLSLKKGSLLVMRGNSADMARHVMCPSPNRRVSITFFRTRSNSNQCQSPTPSMVMSAMTFWKPGISGPYALPSVPPSGPEAMGMMPQWGILRAPLVMLAPVSTRELAGGGGTGVFLPWNVPSRKPAKHLPPRAQRARLLALPSSVESHISDSSSEPSVSA 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2266 533 Gene3D - 205 420 IPR037151 -
Prci1g2266 533 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 37 521 IPR044842 GO:0003729|GO:0006402|GO:0032451
Prci1g2266 533 MobiDBLite consensus disorder prediction 147 170 - -
Prci1g2266 533 SUPERFAMILY Clavaminate synthase-like 212 409 - -
Prci1g2266 533 Pfam 2OG-Fe(II) oxygenase superfamily 322 412 IPR044861 -
Prci1g2266 533 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 317 413 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2266 Prci-Chr1 43244680 43250002 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2266 K10767 - qsa:O6P43_010670 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2266 1 43244680 43250002 Prci3g3344 3 44177873 44182831 CCT
Prci1g2266 1 43244680 43250002 Prci1g2266 1 43244680 43250002 ECH