Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3207 ATGTTTAGCAGACAAAGAGGTGCCAGTGCTTTTGGTATATTCAAATCAAAACTTCAAGGCGAATCATCACTGACATCAGGTTTGCTTCTGAATGTCCCCCGAGAGATTGAATTGTCTGGCTATGGAAGGATCCCAAGTCAAGGCAGTGAGAGCCCTTCGGGGCTTCTGACCGGTGAGAGCTTGAACGTGGAGCTAATTGCTGATTTGGATCTCTTCTTCGAAAGGCTTTACAGCTACTACTGTGAGAAAGGGCTTGGGTGCATCATTGTAAAGTGGACTGTTGAACTTCTGAGTCTAGGTTTCACCATATGCTTTTCTGGATTTTTTTTACTATATGTTGATTGGAATGGGCTTCGCAATGCAAAGTGTGGGATGGATGCAGTTGAATCTGGAATCAAGCCCTGTAATCTAGCAAAAGAGGCTCTTCGGCAACTCCCCTTAACCCCGCTAACACTTACTAAAACTATTATTGTTGTATACTTGGGAATATTTTCCATCTTTTGGATATTTTGTTTCTTGAGGTTCTTTAATCAACTAAAGGACATTCTGGAAATCCGTCAGTTTTACCACAATAGTCTTCATGTAACCGACGATGATATCCAGACCATGCCTTGGGCAACCATCCTTGAAAAGGTTGTTTTGATACAAAGTTCACAACAGCTCTGTTTGGTCAAGGATCTTTCTGCTCATGACATGGTGATGAGATTGATGCGGAAGGAAAATTACTTGATTGGAATGCTCAACAAAGGGGTGCTTGCATTCCCCATTTCTCATTGGGTACCTGGTGCTGGTCCTACAGTGAATTCTGGTCCAAATGGAACACAATGTCGTCTAATACTTACCAAGACCCTTGAGTGGACCTTGAATTGGTGCATCTTACATAGCATGTTTGATCGAAACTTTTGTGTTAAGCAGGACTTTGTGTCTAATCCAAAGACATTAAAGAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTTTCTCCATTTCTTGTCATATTCATGCTGGTATATCTCTTTCTAAGGCATGCTGAACAATTTTATAATCATCCAAGTACAGCTTCATCTCGAAGATGGTCAAATTTGTCTATGTGGATGTTTCGGGAATTCAATGAGGTGGACCATCTCTTCAAGCATCGGGTTAATAACAGTGTAATACATGCTTCTGAGTATCTGAAGCAATTTCCTTCACCTATAGTATCTATCATTGCAAAGTTCATCTCTTTTGTATCGGGTGGTTTTGCTGCAATTCTGATCATCGTTGCTTTTCTTGAGGAATCATTGCTAGAGGGCCATATATTTGGTCGAAACTTATTTTGGTATGGTGCTGTTTTTGGAACAATAACTGCAATTAGCAGGGCTGTGGTTGTGAATGAGCTTCTGGTCCTAGATCCCAAGGGAGCAATGTTGATGGTGGTTCAACATACTCATTATATGCCAAAGAGATGGCGTGGCAAAGAAAGCACTGAAATGGTTCACCTTGAATTTGAAACATTGTTTCAGTATACAGGGATGATGTTACTTGAGGAGATGGCCTCAATTTTTCTCACTCCATATTTACTTATGTTTATTGTCCCAAAGCGGGTCGATGATATTTTGCAGTTCATTGCAGATTTTACAGTGAATGTTGAAGGTGTTGGCCATGTTTGCAGTTTTAGTGTCTTTGACTTTCAAGAGCATGGAAACAGCAATTATGGTTCCCCACATAATGCACCTCGTAGTCGGAGGAGTTCTCAGGGGAAGATGGAGAAATCATTTTTGAGTTTTCAGAGTAGTTATCCATCATGGGCATCAGATTCTAGGGGGAAGCAATTTTTGCTAAATCTTGGAACCTTCAGAGAGCAAAATTGGCAAGGACATGGAAGCAGCCATGCATTTCCTCCTCCTAGGTCGTGCAAGGGTAGTTCCAATACCAGGATCTACGGAAGCAGAAACAGGTTTACGTCCTGGGAAATGCCATGTGTATTTGGCAATCACTTGGGTTCGTTGTGGCTGATTGATGCCAACCAAAATAACCATCCTTATCTTCTAGATTGGTACTATACATCTCGACCTCATGATGCAACTATGCGAAAAGCTCCAACAGAATCATCCGAAGAAATTGAGTTTCATTTGGGAGATTATCCACTGCCCTCCAACTTGGCTCCTAATGTACCTGGTTATGAAGGATATCACGAGGATAGCTCAGCATCTCATCTTGGGGCTTCCACATTGGCTCCCATCTTCAAGGAAAGCTTAATTCAGGATCATAATTTTACTGACCGTTCCCACTCTATCAGAAATCACTGGTGGGCAAGAAGTGGCCCGCAGGTTGGGCAAGCTCAGACAAGCTTTTTTGAGCCTCCAGATTTTAATTACCGAACATCGTGGAATTATTATGATAAGTTTTCTGACAGGAGCTTGGAGGATCCAGAACAAGACTTGGACTGGAGAGACCATCAAAGATTAGCTAAAACAACTTGCCCAGATGACTTGGAGACGGGAGACTTCAAATTTCATGTTGATGATATCCATGGCAGACCTCCAGAAGTGGCCACTGTTAATCCAAACACTGCAAGCTTTTGA 2568 0.419 MFSRQRGASAFGIFKSKLQGESSLTSGLLLNVPREIELSGYGRIPSQGSESPSGLLTGESLNVELIADLDLFFERLYSYYCEKGLGCIIVKWTVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCNLAKEALRQLPLTPLTLTKTIIVVYLGIFSIFWIFCFLRFFNQLKDILEIRQFYHNSLHVTDDDIQTMPWATILEKVVLIQSSQQLCLVKDLSAHDMVMRLMRKENYLIGMLNKGVLAFPISHWVPGAGPTVNSGPNGTQCRLILTKTLEWTLNWCILHSMFDRNFCVKQDFVSNPKTLKKRLMVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSMWMFREFNEVDHLFKHRVNNSVIHASEYLKQFPSPIVSIIAKFISFVSGGFAAILIIVAFLEESLLEGHIFGRNLFWYGAVFGTITAISRAVVVNELLVLDPKGAMLMVVQHTHYMPKRWRGKESTEMVHLEFETLFQYTGMMLLEEMASIFLTPYLLMFIVPKRVDDILQFIADFTVNVEGVGHVCSFSVFDFQEHGNSNYGSPHNAPRSRRSSQGKMEKSFLSFQSSYPSWASDSRGKQFLLNLGTFREQNWQGHGSSHAFPPPRSCKGSSNTRIYGSRNRFTSWEMPCVFGNHLGSLWLIDANQNNHPYLLDWYYTSRPHDATMRKAPTESSEEIEFHLGDYPLPSNLAPNVPGYEGYHEDSSASHLGASTLAPIFKESLIQDHNFTDRSHSIRNHWWARSGPQVGQAQTSFFEPPDFNYRTSWNYYDKFSDRSLEDPEQDLDWRDHQRLAKTTCPDDLETGDFKFHVDDIHGRPPEVATVNPNTASF 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3207 855 PANTHER APG9 AUTOPHAGY 9 1 798 IPR007241 GO:0006914
Prci3g3207 855 Pfam Autophagy protein ATG9 64 557 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3207 Prci-Chr3 43194239 43200674 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3207 K17907 - qsa:O6P43_010522 1315.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2447 1 44674641 44685892 Prci3g3207 3 43194239 43200674 CCT
Prci3g3207 3 43194239 43200674 Prci3g3207 3 43194239 43200674 ECH