Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2447 ATGTTTATCAGGCCAAGGGGTCCTAATGTTTTTAACTTATTCAAATGGAAGCGTCAAGATGGATCATCTCTAACCACAGGTTTGCTTCAGGATATTCCACCAGAGATTGAGTTGTCTGACTATGGAAGGATTCCAAGTCCAGGCAGTGAGAGCCCTTCAGGGCTTCTTAATGGTGAGAGCTTGAACGTAGAGCCAATTTCCGATTTGGACCTCTTCTTTGAAAGGCTTTACAGCTACTACTGTGAGAAAGGGCTTTGGTGCATTATTATAAAGTGGATTGTTGAACTTCTTAGTTTAGGATTTACCATATGTTTCTCAGGATTTTTCTTATTATATGTTGATTGGAATGGACTTCGCAATGCAAAGTGTGGGATGGATGCAGTTGAATCTGGAATTAAGCCATGTGATCTTGGTAAAGAAGCTATTCATCAACACCCTTTAACCCCGCTAACACTTACAAAGGTTGTTATTGTTGGATATTTAGCAATATTTTCTATCTATTGGATATTTTGTTTCTTGAGGTTCTTTGCTCAGCTAAAGGACATTCTGGAAATCCGTCACTTTTACTACAATAGTCTCCATGTTACTGACAATGAAATCCAAACTATGCCCTGGGCAACAGTTCTTGAAAAGGTTGGTTTGGTGCAAAGTTCACAGCAGCTGTGTGTGGTAAAGAATCTCTCTACTCATGACATGGTGATGAGACTGATGCGGAAAGAAAACTACTTGATTGGAATGATCAACAAGGGAGTGCTTGCGTTCCCCATTTCTCAGTGGATCCCAGGTGCCGGTCCTACAGTGAAATGTGGTCCTAATGGAACACAATATCGTCTAATACTAACCAAGACCCTTGAGTGGACTTTGAACTGGTGCATCCTGCAAAGCATGTTTGATCGAAACTTTTGTGTTAGAAGGGATTTTTTGTCCAACCCACAGACATTGAAGAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTATCTCCATTTCTTGTCATATTCATGTTGGTGTATCTCTTTCTGAGGCATGCTGAACAATTTTATAATCATCCAAGCACAGCATCATCTCGAAGATGGTCAAACTTGTCAAGGTGGATCTTTAGGGAATTCAACGAGGTGGACCATCTCTTCAAGCATCGGATAAGTAGCAGCGCGATGCATGCTTCTGATTATCTCAAGCAATTTCCTTCGCCTATTATATCTATCATTGCAAAGTTCATATCTTTCGTATCAGGTGGATTTGCTGCAATTCTGATCATCATTGCTTTTCTTGAGGAATCTCTTCTCGAGGGCCATATATTTGGTCGAAACTTGTTTTGGTATGCTGCTGTTTTTGGAACTATAACAGCTGTTAGCCGGTTTGCAGTGACAAATGAGCTTCTTGTTCTAGATCACGAGGGAGCAATGTCTATGGTGGTTCAACATACACACTATATGCCAAAAAGATGGCGTGGCAAAGAAAGTACTGAAATGGTCCACGTTGAGTTTGGAACACTATTCCAGTACACTGTGATGATGTTACTTGAGGAGATGGCCTCAATTTTCCTCACTCCATATTTGCTTTTATTTGTCGTCCCAAAGCGAGTTGATGATATTCTCCAGTTCATTGCAGATTTCACGGTGGATGTTGAAGGGGTTGGCCATGTTTGCAGTTTTAGTGTCTTCGATTTTCAAGCCCATGGAAACAGCAATTATGGTTCCCCATGCAATGCACCTCGGAGCAGGAGGAGTTCACAGGGAAAGATGGAGAAATCATTTCTGAGCTTTCAGAGCACCTACCATTCATGGGAACCAAATTTTCAGGGGAAGCAGTTTTTGCTGAATCTTAGAACGTTGGGAGAGCAAAATTTACCAGGACATGGAAACAGATATGCATCTTCCCCTCCTACAAGGTGGATGGGTGGTCCCTATATGAGGAGTAATGGAGACAGGAACTTGTTCACATCCAGGGAAACGGCGCCTAATACTCTCAAAATTGGTAATCACCTGGGTTCATTGTGGCCAAGTGATGCTAATCAAAACAATAACCTTTATATTCTTGATTGCTACTATACTTCTCGACCTCATCATGTTCCAACAGAACCATTAGAGAAGACGGAGCATCATTCCAGAGAGTATTGGATGTCCTTTGAGAATGAACCTGGGTATGATGAATACTTAAGAGAGTATCATGGGAATCGAGCTGAGTCTCATTTTGGGGCATCCACATCAGCTCCCTTTTTCAGGGAAGCTCTTCTCGAGGATCGACTGAGTAGTGATCTGCCAGAGTCTAGCAAGAGTCAATGGTGGGCTAGAAGTCGACCCCTTGGCGGACAAGCTCAGGCTAGCTTTTTCGAGCCTCCAGATTTCAATCACCAGACATTTAACTATCGTGATAGGTTATCTGATAGATGCTCAGATGATCAAGAGCAACACTTGGACTGGAGAGATTATAACAGGTTATCTAGAACAACTCACGCAGACGACTTAGAGGCAGGGGAATTTAATCTTCATTTTGATGATATTTATAGTAGACCCCCTGAAACTCCCACTTATAATTCAAGCACCGCTAACCTCTGA 2562 0.42 MFIRPRGPNVFNLFKWKRQDGSSLTTGLLQDIPPEIELSDYGRIPSPGSESPSGLLNGESLNVEPISDLDLFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCDLGKEAIHQHPLTPLTLTKVVIVGYLAIFSIYWIFCFLRFFAQLKDILEIRHFYYNSLHVTDNEIQTMPWATVLEKVGLVQSSQQLCVVKNLSTHDMVMRLMRKENYLIGMINKGVLAFPISQWIPGAGPTVKCGPNGTQYRLILTKTLEWTLNWCILQSMFDRNFCVRRDFLSNPQTLKKRLMVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWIFREFNEVDHLFKHRISSSAMHASDYLKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAVSRFAVTNELLVLDHEGAMSMVVQHTHYMPKRWRGKESTEMVHVEFGTLFQYTVMMLLEEMASIFLTPYLLLFVVPKRVDDILQFIADFTVDVEGVGHVCSFSVFDFQAHGNSNYGSPCNAPRSRRSSQGKMEKSFLSFQSTYHSWEPNFQGKQFLLNLRTLGEQNLPGHGNRYASSPPTRWMGGPYMRSNGDRNLFTSRETAPNTLKIGNHLGSLWPSDANQNNNLYILDCYYTSRPHHVPTEPLEKTEHHSREYWMSFENEPGYDEYLREYHGNRAESHFGASTSAPFFREALLEDRLSSDLPESSKSQWWARSRPLGGQAQASFFEPPDFNHQTFNYRDRLSDRCSDDQEQHLDWRDYNRLSRTTHADDLEAGEFNLHFDDIYSRPPETPTYNSSTANL 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2447 853 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
Prci1g2447 853 PANTHER APG9 AUTOPHAGY 9 5 791 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2447 Prci-Chr1 44674641 44685892 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2447 K17907 - qsa:O6P43_010522 1349.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2447 1 44674641 44685892 Prci3g3207 3 43194239 43200674 CCT
Prci1g2447 1 44674641 44685892 Prci1g2447 1 44674641 44685892 ECH