Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3137 ATGTCCTTGATAGCAAAGATTTTTTCGATCGCCTCCACTCGTCGCTTCCTCTTTGGTGATCATTCAATGCCTGAGATTGGCTCTTCCTCATTCCATGCCATAGGCAACGTTTCTTCCCCCACAATAATTGTTGAAAGAGCAGGACTCTTTGCTTGGACACACAAAAGCTGGAGAGTTAGAGAGGAGTTTGCTCGGACTGTCACATCTGCAATTGGTCTATTTGCATCTACTGAGCTCACCCTTCAACGTGCTATTCTTCCTTCACTTTTGCGGTTGCTAAATGATCCAAATCCTGGTGTTAGGGAAGCAGCTATCTTGTGCATTGAGGAGATGTATGCACAAGCTGGTCCTCAATTTCGTGATGAACTTCAGCGCCACAACCTTCCTTCTTCTTTGGTGAAAGATATTAATGCTAGGCTAGAGGGTATTCAACAAGTACGTTCTTCTGATGGCATACCTGGTGGCTTTGTTGCTGGAGAAATTAAACCTTTAAGCTTTACTTCCAAGAAAAGCAGCCCAAAAGCTAAAAGTTCATCAAGGGAAAACTCTATTTTTGCAGGAAATGGTGATGTCACAGAGAAACCCATAGATTCTATCAAAGTGTACTCTGAGAAGGAGTTAATCAGGGAAATTGATAAGATTGCATCTACCCTTGTCCCAGAAAAGGATTGGTCAATTCGTATTGCTGCTATGCAGAGAGTTGAAGGTCTTGTTTTGGGAGGTGCTGCTGACTATCCATGTTTTCGAGGACTCCTGAAGCAACTTGTTGGACCTTTAACCACTCAATTATCAGATCGAAGGTCCAGCATTGTGAAGCAGGCTTGCCATTTATTGTGCTTTCTGTCAAAAGAACTCCTAGGTGATTTTGAAGCTTGTGCTGAAGTGTTCATACCTGTCCTTTTTAAGCTGGTTGTGATCACTGTACTGGTAATTGCAGAGTCTGCAGATAACTGCATAAAGACGATGTTGCGTAACTGCAAAGTTGCCCGAGTGCTTCCTTGTATAGCTGATTGTGCAAAAAAGGATCGCAATGCAGTACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGATATTGGAACAATGGCCTGATGAACCAGAAATACAGCGATTGGCTGACTTATATGAGGATCTGATAAGGTGTTGTGTTTCAGATGCAATGAGTGAGGTAGCTTTCATAGTTTTAAGTTATTTGAATTCACGACTTCTGTCTGTCCTTTTTAAGCTGGTTGTGATCACTGTACTGGTAATTGCAGAGTCTGCAGATAACTGCATAAAGACGATGTTGCGTAACTGCAAAGTTGCCCGAGTGCTTCCTTGTATAGCTGATTGTGCAAAAAAGGATCGCAATGCAGTACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGATATTGGAACAATGGCCTGATGAACCAGAAATACAGCGATTGGCTGACTTATATGAGGATCTGATAAGGTGTTGTGTTTCAGATGCAATGAGTGAGGTACGGTCTACTGCAAGGATGTGCTATAGACTATTTGCAAAAACATGGCCTGAACGTTCCCGTCGCCTATTTTCATCCTTTGATCCAGTTATTCAAAGGTTAATAAATGAAGAGGATGGAGGAGTACACAAGCAACATGCTTCACCTTCCATTCGTGACAGAGGTGCACTGGTGTCATTAAATAGCCAAGCCTCTGCTCCTTCTAATCTACCTGGATATGGAACTTCTGCTATTGTTGCAATGGACAGGAGTTCAAGTTTATCATCAGGGACATCTGTCTCCTCTGGTTTACTTCTTTCACAGGCAAAATCACTTGGTAAAGGTGCTGAGCGAAGTTTGGAAAGTGTGTTGCATTCTAGCAAACAGAAGGTCACTGCCATTGAAAGCATGCTCAGAGGCTTGGATTTGTCTAATAAGCATAGTTCTGCTCTCCCGTCATCCAGCTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCTGCTGCTGTCCCAGCATCCAGTAATCTGACAAACTCTTTAAGAACAGAATCAGTTGTATCTGGTGTCAATAAAGGTAGTAACCGAAATGGTGGCTTGGGTCTGTCTGACATAATTTCACAAATTCAAGCTTCCAAAAACTCCAGTAAGGTATCATATAATAGTAATACTAGTATTGAACCTTTATCAGCACTTTCATCATACTCAAGTAAAAGGGTTTCTGAAAGATTGCAAGAAAGAAATTCCGTTGATGACAATGGCAACAATAGGGAGGCTAGGTGGGCTATGAACCACCGCATTGATGGGCAATATTTGGATACCCCTTATAGAGAAGAAAACTTTAGGGATTCACAGAATAGTTATGTGCCTAATTTCCAGAGGCCACTAGTGAGAAAAAATGTAGCTGGGCGTATGTCTGCTGGCCAGAGGAGAAGTTTTGACGATAGCCAACTTTCTCTTGGAGAGGTGTCAAGTTATGCAGATAGACCAGCATCTCTCCCTGAAGCTCTAAGTGAAGGGCTTAGTTCAGGATCTAACTGGTCTGCTAGGGTTGCTGCTTTTAACTATCTTCACAACTTGTTACAGCTAGGTCCAAGGGGAATTCAGGAAGTGGTCCAGAATTTTGAAAAGGTTATGAAGTTGTTTTTTCAGCACTTGGATGATCCTCACCATAAAGTTGCACAGGCTGCTCTTTCAACACTTTCGGATGTTGTTCCAGCATGCCGGAAGCCCTTTGAGAGTTACATGGAAAGAATATTACCCCATGTGTTTTCTCGGTTAATTGACCCAAAAGAACTTGTCAGGCAAACATGCTCCATGACGTTGGAAGTTGTTAGCAAAACTTACAGTATAGATTATCTTTTACCTGCATTACTACGTTCACTCGATGAACAAAGGTCTCCTAAGGCAAAATTGGCTGTCATTGAGTTTGCAATCAGTTCCTTCAACAACCATTCACTGAATCCAGAAGGTGCTGCCAATATTGGCATCCTGAAGTCATGGCTTACCAAGTTAACTCCTTTGGTTCATGACAGAAATACAAAGCTTAAAGAAGCGGCCATTACATGCATGATATCAGTATACTCTCACTTTGATTCAACTGCACTGCTAAATTTTATCCTCAGTTTGTCAGTTGAAGAACAAAATTCATTGAGACGAGCCCTTAAACAATATACTCCTCGCATTGAAGTGGACCTAATAAACCATTTGCAGAACAAGAAGGAGAGACAACGCTCTAAGTCTTCATTTGATCCATTTGATGTTGGAACATCCTCTGAAGATGGATATGTTGGTTTCTCTAGGAAAGCTAACTACCTTGGAAGGTATTCTGCTGGTTCTCTTGATGGTGATGGTGGTAGGAAGTGGAGTTCCCAAGATTTAACCCTTGTTAAAGCCAGTTTTTGCCAAGCAGCGTCTGGTGAAAATCAGGAACATCCATATCAAAATAATGAAACTGATTCTACTAGTGGTATTCTTGGTTCAAGGACTAAAGATCCTGTTGATGCTGTCAATTCAATGGGCCAAAACTTTGGCTCTCATAATAGTCAACCTGGGCATTCAGATGGTAACATGGACTTTGAGGGTCTATCAACGCCTCATTTGGATGTCAATGATCTGATGTCCTTAGAACATTTAAATTTAAATGTAGGCTTTGGACTTGAAAAAGATCCTCCTGAATTGGACCTTGATCATTGCTCGCCTGAATATGTCAAGAATAACTTGAAAGATTCAGAGCCTGGCATTCCTCAAATCCTTCATCTGATATGCAGTGCGGGTGATGGCATTCCTATTTCAAGCAAGCAAGCTGCACTTCAACAGTTAATTGAAGTTTCTACTGAAAATGATTCTTCTATTTGGATGAAGTCCTTTAATCAGATTCTGGCAGTTGTGCTTGAAGAGTTGGATGATTCAGACTCCGCAGTTAGAGAGCTTGCTCTTTCAGTTGTAGTTGAAATATTAAAAAACCAGAAAGATGCCATGAAAGAGTCAGTTGAGATTGTAATTGAAAAGCTGCTTCATGTTACAAAGGATACTGTTCCTAAGGTCGCAAACGAAGCTGATCACTGCCTTACCATTGTTTTGTCTCAGTGTGATCCATTCAGATGTTTAAGTGTTATTGTCCCTTTACTGGTTACTGAAGATGAGAAAAATCTTGTTACCTCCATAAATTGTTTGACGAAGCTTATTGGCCGGCTTTCTCAGGAGGAATTGATGGCTCAATTACCCTCCTTTCTGCCTCCTCTTTTTGATGCTTTTGGAAACCAGAGCGCAGATGTTCGTAAGACAGTTGTGTTCTGTCTAGTGGACATATACATCGTGCTCGGGAAAGCATTCTTGCCATACTTGCAAGGTCTTAATAGCACGCAGTTGAAGCTGGTCACCATTTATGCAAATCGAATCTCACAGGCCAGAACAGGCACGCCAATTGACACCACTCAGTGA 4416 0.4173 MSLIAKIFSIASTRRFLFGDHSMPEIGSSSFHAIGNVSSPTIIVERAGLFAWTHKSWRVREEFARTVTSAIGLFASTELTLQRAILPSLLRLLNDPNPGVREAAILCIEEMYAQAGPQFRDELQRHNLPSSLVKDINARLEGIQPXVRSSDGIPGGFVAGEIKPLSFTSKKSSPKAKSSSRENSIFAGNGDVTEKPIDSIKVYSEKELIREIDKIASTLVPEKDWSIRIAAMQRVEGLVLGGAADYPCFRGLLKQLVGPLTTQLSDRRSSIVKQACHLLCFLSKELLGDFEACAEVFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPCIADCAKKDRNAVLRARCCEYALLILEQWPDEPEIQRLADLYEDLIRCCVSDAMSEVAFIVLSYLNSRLLSVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPCIADCAKKDRNAVLRARCCEYALLILEQWPDEPEIQRLADLYEDLIRCCVSDAMSEVRSTARMCYRLFAKTWPERSRRLFSSFDPVIQRLINEEDGGVHKQHASPSIRDRGALVSLNSQASAPSNLPGYGTSAIVAMDRSSSLSSGTSVSSGLLLSQAKSLGKGAERSLESVLHSSKQKVTAIESMLRGLDLSNKHSSALPSSSLDLGVDPPSSRDPPFPAAVPASSNLTNSLRTESVVSGVNKGSNRNGGLGLSDIISQIQASKNSSKVSYNSNTSIEPLSALSSYSSKRVSERLQERNSVDDNGNNREARWAMNHRIDGQYLDTPYREENFRDSQNSYVPNFQRPLVRKNVAGRMSAGQRRSFDDSQLSLGEVSSYADRPASLPEALSEGLSSGSNWSARVAAFNYLHNLLQLGPRGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLSDVVPACRKPFESYMERILPHVFSRLIDPKELVRQTCSMTLEVVSKTYSIDYLLPALLRSLDEQRSPKAKLAVIEFAISSFNNHSLNPEGAANIGILKSWLTKLTPLVHDRNTKLKEAAITCMISVYSHFDSTALLNFILSLSVEEQNSLRRALKQYTPRIEVDLINHLQNKKERQRSKSSFDPFDVGTSSEDGYVGFSRKANYLGRYSAGSLDGDGGRKWSSQDLTLVKASFCQAASGENQEHPYQNNETDSTSGILGSRTKDPVDAVNSMGQNFGSHNSQPGHSDGNMDFEGLSTPHLDVNDLMSLEHLNLNVGFGLEKDPPELDLDHCSPEYVKNNLKDSEPGIPQILHLICSAGDGIPISSKQAALQQLIEVSTENDSSIWMKSFNQILAVVLEELDDSDSAVRELALSVVVEILKNQKDAMKESVEIVIEKLLHVTKDTVPKVANEADHCLTIVLSQCDPFRCLSVIVPLLVTEDEKNLVTSINCLTKLIGRLSQEELMAQLPSFLPPLFDAFGNQSADVRKTVVFCLVDIYIVLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGTPIDTTQ 1472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3137 1472 SUPERFAMILY ARM repeat 53 538 IPR016024 -
Prci3g3137 1472 SMART TOG_3 817 1060 IPR034085 -
Prci3g3137 1472 SMART TOG_3 1252 1465 IPR034085 -
Prci3g3137 1472 SMART TOG_3 207 421 IPR034085 -
Prci3g3137 1472 MobiDBLite consensus disorder prediction 634 649 - -
Prci3g3137 1472 MobiDBLite consensus disorder prediction 1132 1188 - -
Prci3g3137 1472 Pfam CLASP N terminal 402 531 IPR024395 -
Prci3g3137 1472 Pfam CLASP N terminal 836 1027 IPR024395 -
Prci3g3137 1472 Pfam CLASP N terminal 210 391 IPR024395 -
Prci3g3137 1472 SUPERFAMILY ARM repeat 439 1463 IPR016024 -
Prci3g3137 1472 Gene3D - 827 1051 IPR011989 -
Prci3g3137 1472 MobiDBLite consensus disorder prediction 169 187 - -
Prci3g3137 1472 Pfam HEAT repeat 85 112 IPR000357 GO:0005515
Prci3g3137 1472 MobiDBLite consensus disorder prediction 169 188 - -
Prci3g3137 1472 MobiDBLite consensus disorder prediction 1132 1153 - -
Prci3g3137 1472 Coils Coil 1309 1329 - -
Prci3g3137 1472 PANTHER CLASP 403 1459 - -
Prci3g3137 1472 MobiDBLite consensus disorder prediction 634 668 - -
Prci3g3137 1472 Gene3D - 1256 1464 IPR011989 -
Prci3g3137 1472 Gene3D - 24 145 IPR011989 -
Prci3g3137 1472 Gene3D - 192 393 IPR011989 -
Prci3g3137 1472 Gene3D - 395 540 IPR011989 -
Prci3g3137 1472 MobiDBLite consensus disorder prediction 1160 1180 - -
Prci3g3137 1472 ProSiteProfiles HEAT repeat profile. 85 123 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3137 Prci-Chr3 42611421 42624622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3137 K16578 - gmx:100820523 1677.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2622 1 45724377 45740057 Prci3g3137 3 42611421 42624622 CCT
Prci3g3137 3 42611421 42624622 Prci3g3137 3 42611421 42624622 ECH