Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2622 ATGGAGGAAGCGCTGGAACTTGCGCGCACCAAGGACACGAAGGAGAGAATGGCCGGGGTGGAGCGCCTTCACCAACTTCTGGAATCTTCGAGAAAGAGCCTCACTTCATCCGAAGTTACTTCCCTTGTCGATTGTTGCTTGGATCTCTTGAAAGACAACAACTTTCGGGTCTCTCAGGGTGCACTTCAATCTTTGGCCTCTGCTGCTGTGCTCTCTGGCGAGCATTTCAAACTTCACTTCAATGCGCTTGTTCCTGCCGTCGTTGATCGCTTAGGGGATTCCAAGCAACCAGTTCGTGACGCTGCCAGAAGACTCTTGCTTACTCTCATGGAGGTTTCTTCTCCCACAATAATTGTTGAAAGAGCAGGTTCCTTTGCCTGGACGCATAAAAGCTGGAGAGTCAGAGAGGAGTTTGCACGGACTGTCACTTCTGCAATTGGTCTATTTGCATCCACTGAGCTTACTCTTCAACGGGCTATTCTTCCTCCAATTTTGCAGTTGCTCAATGATCCAAACCCTGGTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGCTCAAGCTGGACCTCAATTTCGTGATGAACTTCAGCGTCACAATCTTCCATCATCTATGGTTAAAGATATTAATGCCAGGCTTGAGGGAATTCAACCAAAAGTTCGCTCTTCAGATGGTGGAAGTGGTTTTATAGCTGGGGAACTTAAGCCTTTGGGTGTTAACCCCAAGAAGAGTAGTCCAAAGGCTAAAAGTTCATCAAGGGAGACATCACTTTTTGGAGGAGAAGGCGATCTCACAGAGAGATCCATTGATCCTGTCAAGGTTTATTCAGAAAAGGAGTTAATCAGGGAATTTGAAAAGATTGCATCAACCCTTGTGCCAGAAAAGGACTGGTCAATTCGAATTGGTGCCATGCAAAGAGTTGAAGGTCTTGTTTTGGGAGGTGCTGCTGACTATCCATGTTTCCGGGGACTCTTGAAACAACTTGTTGGACCTTTAAGCGTGCAATTATCTGATCGAAGATCTAGCATTGTGAAACAGGCTTGCCATCTATTATGCTTTTTGTCCAAGGAACTCTTGGGTGATTTCGAACAATGTGCTGAAATGTTCATCCCGGTCCTTTTCAAGCTGGTTGTGATTACTGTACTTGTGATTGCAGAGTCTGCGGATAACTGCATAAAAACGATGCTGCGTAATTGTAAAGTTGCTCGTGTGCTTCCTCGTATGGCTGATTGTGCAAAAAATGATCGCAGTGCTGTACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGATATTAGAACATTGGCCTGATGCTCCAGAAATACAGCGATTAGCTGATTTATATGAGGATCTGATAAAGTGTTGTGTATCAGATGCAATGAGTGAGGTTCGATCAACTGCAAGGATGTGCTATAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCCCGCCGCTTGTTTTCATCCTTTGATCCTGTCATTCAAAGGTTGATAAATGAAGAGGATGGAGGAATACACAGGCGGCATGCCTCACCTTCCATTCGTGATAGAGGTGCATTGCCGTCATTAAGTAGTCAAGCCTCTGCTCCCTCAAGTCTACCTGGATATGGGACTTCTGCTATTGTTGCAATGGACAGAAGTTCTAGTTTATCATCTGGGGCATCTGTCTCCTCTGGTATTACTCAAGCAAAGTCGCTTGGTAAAGTTACAGAGCGCAGCTTGGAAAGTGTGCTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGTATGCTTAGAGGTTTGGATTTATCTGACAAGCATAATTCATCAGCCCTCCGCTCATCAAGTTTGGATCTAGAATCAACTGCTTCGGGTGTCAATAAAGGAACGAATCGAAATGGTGGTTTGGGTTTATCTGATATAATCACTCAAATTCAAGCTTCCAAAGATTCTGGCAAGTTATCATATCATAGTAATGTTGCTATGGAGCCTTTATCAGCACTCTCATCATACTCCAGTAAAAGGGCTTCTGAAAGGCTTCAAGGCAGAGGCTCTATTGATGACAACAGTGACATTAGGGAGGCTAAGCGGTTTATGAACCCCCACATTGATAGGCATTATATGGATGCGACTTATAGGGATGGAAACTTTAGGGATTCGCACAATAGTCATGTGCCTAATTTCCAGAGACCATTGTTGAGGAAAAATGTAGCGGGGCGAATGTCTGTTGGAAGGAGAAGAAGTTTTGATGACAGCCAACTATCCCTTGGAGAATCATCCAATTATACAGATGGACCAGCATCTCTTCATGAAGCCCTGAGTGAAGGACTTAGTTCCGGTTCTGATTGGTCTGCTAGGGTTGCTGCTTTTAATTATCTTCACTCATTGTTACAGCAAGGTCCAAAGGGAATTCAAGAAGTAGTCCAGAATTTTGAGAAGGTAATGAAGCTTTTTTTCCAGCACTTGGATGATCCACACCATAAAGTTGCACAGGCTGCTCTTTCAACCCTTGCTGATATTATTCCAGCATGCCGAAAGCCTTTTGAGAGTTACATGGAAAGAATATTACCCCATGTGTTTTCTCGGTTAATTGACCCTAAAGAACTTGTTAGGCAACCAAGCTCAATGACTTTGGAAGTTGTGAGCAAGACTTACAGTGTAGATTCTCTCTTACCTGCATTGCTCCGCTCACTTGACGAACAGAGGTCTCCAAAAGCAAAATTGGCTGTTATTGAATATGCAATCAGCTCCTTTAACAAGCATGCAATGAATCCTGAAGGTGCTGCTAATACTGGGATCCTGAAATTATGGCTTGCCAAATTAGCACCACTGGCACATGACAAAAATACAAAGCTCAAAGAAGCAGCGATTACATGCATTATATCAGTGTATTCTCACTTTGATTCTACTGCAGTCCTGAATTTCATTCTTTGTTTGTCAGTTGAGGAGCAAAATGTGTTGAGGCGAGCTCTTAAACAATACACTCCTCGCATTGAAGTAGACTTGATAAACTTTCTACAGAACAAGAAAGATAGACAGCGATCTAAGTCTTCCTATGATCCATCTGATGTAGTTGGAACATCCTCAGAAGAGGGGTATGTTGGTGTTTCTAGGAAATCTCATTACCTTGGAAGGTATTCTGCTGGTTCCCTTGATAGCGACAGTGGTAGGAAGTGGAGTTCCCAAGACTCAACCTTTGTTAAAACCAGCCTTAGCCAAGCAGCTTCTGGTGAAACTCAGGAATTTTTGCATCAGAATCATGAGATTGATTTTACCAAGGGTAGTCATGGTCCAAAAACCAACGATCTTGCATCCGCAGTCAATCTGATAAGCCAAAATGTTGCCTCTCAAGCTAGTCAATTTGGGCATGTGGACAATACCATTAACTTTGAGGGTCTTTCAAATCCTGCAAACGGTCTGATGTCTGTAGAACATTCAAATGTCACTGAAAGCTTGGGAGATGATAAAGAACATCCTTCTGAATTGGACCATAACCATCACTTTGCTGAAGCTACGAATGTTAACCCTTTGACCGAGACCGGCCCCAGCATTCCTCAAATTCTTCATCTGGTAGGCAGTGGGGGTGATGGAAGCTCTGTTTCAAGCAAGAGGACTGCACTTCAACAGTTGGTTGAAGCTTCTAGGGCAAATGATCATTCTATTTGGACTAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGAGATCATACTCTGTCATTAATAGATGAAATGCTCAGAAACCAGAAAGATGCCATGGAAGATTCAGTCGAGATTGTAATTGAGAAGTTGCTTCATGTTACTAAGGATATTGATCCCAAGGTCTCTAACACAGCAGAGCACTGCCTGACTATTGTTTTATCTCAATACGATCCATTCAGATGCTTGAGTGTTATTGTCCCTTTACTGGTTTCTGAGGATGAGAAAACTCTTGTCACCTGCATAAACTGCTTGACAAAGGTTTTGGGCCGACTCTCTCAGGAGGAATTGATGGCTCAGTTGCCTTCATTTCTGCCTGCACTTTTTGAAGCTTTTGGAAACCAGAGTGCTGATGTTCGTAAGACTGTGGTTTTCTGTCTAGTGGATATATACATCATGCTGGGGAAAGCATTCTTGCCATACTTGCAGGGGCTTAACAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGAATTTCACAAGCCAGGACGGGAGTGGTGATTGATGCCACCCAGGAGTAG 4239 0.4341 MEEALELARTKDTKERMAGVERLHQLLESSRKSLTSSEVTSLVDCCLDLLKDNNFRVSQGALQSLASAAVLSGEHFKLHFNALVPAVVDRLGDSKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTHKSWRVREEFARTVTSAIGLFASTELTLQRAILPPILQLLNDPNPGVREAAILCIEEMYAQAGPQFRDELQRHNLPSSMVKDINARLEGIQPKVRSSDGGSGFIAGELKPLGVNPKKSSPKAKSSSRETSLFGGEGDLTERSIDPVKVYSEKELIREFEKIASTLVPEKDWSIRIGAMQRVEGLVLGGAADYPCFRGLLKQLVGPLSVQLSDRRSSIVKQACHLLCFLSKELLGDFEQCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRMADCAKNDRSAVLRARCCEYALLILEHWPDAPEIQRLADLYEDLIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPVIQRLINEEDGGIHRRHASPSIRDRGALPSLSSQASAPSSLPGYGTSAIVAMDRSSSLSSGASVSSGITQAKSLGKVTERSLESVLHASKQKVTAIESMLRGLDLSDKHNSSALRSSSLDLESTASGVNKGTNRNGGLGLSDIITQIQASKDSGKLSYHSNVAMEPLSALSSYSSKRASERLQGRGSIDDNSDIREAKRFMNPHIDRHYMDATYRDGNFRDSHNSHVPNFQRPLLRKNVAGRMSVGRRRSFDDSQLSLGESSNYTDGPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIIPACRKPFESYMERILPHVFSRLIDPKELVRQPSSMTLEVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEYAISSFNKHAMNPEGAANTGILKLWLAKLAPLAHDKNTKLKEAAITCIISVYSHFDSTAVLNFILCLSVEEQNVLRRALKQYTPRIEVDLINFLQNKKDRQRSKSSYDPSDVVGTSSEEGYVGVSRKSHYLGRYSAGSLDSDSGRKWSSQDSTFVKTSLSQAASGETQEFLHQNHEIDFTKGSHGPKTNDLASAVNLISQNVASQASQFGHVDNTINFEGLSNPANGLMSVEHSNVTESLGDDKEHPSELDHNHHFAEATNVNPLTETGPSIPQILHLVGSGGDGSSVSSKRTALQQLVEASRANDHSIWTKYFNQILTVVLEVLDDSDSSIRDHTLSLIDEMLRNQKDAMEDSVEIVIEKLLHVTKDIDPKVSNTAEHCLTIVLSQYDPFRCLSVIVPLLVSEDEKTLVTCINCLTKVLGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGVVIDATQE 1412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2622 1412 Gene3D - 766 990 IPR011989 -
Prci1g2622 1412 MobiDBLite consensus disorder prediction 246 260 - -
Prci1g2622 1412 SUPERFAMILY ARM repeat 290 1402 IPR016024 -
Prci1g2622 1412 PANTHER CLASP 31 1398 - -
Prci1g2622 1412 MobiDBLite consensus disorder prediction 506 534 - -
Prci1g2622 1412 SUPERFAMILY ARM repeat 2 401 IPR016024 -
Prci1g2622 1412 MobiDBLite consensus disorder prediction 602 630 - -
Prci1g2622 1412 Gene3D - 266 505 IPR011989 -
Prci1g2622 1412 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Prci1g2622 1412 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Prci1g2622 1412 SMART TOG_3 269 513 IPR034085 -
Prci1g2622 1412 SMART TOG_3 750 999 IPR034085 -
Prci1g2622 1412 SMART TOG_3 3 224 IPR034085 -
Prci1g2622 1412 SMART TOG_3 1168 1404 IPR034085 -
Prci1g2622 1412 FunFam Protein peg1 265 512 - -
Prci1g2622 1412 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Prci1g2622 1412 Pfam CLASP N terminal 283 499 IPR024395 -
Prci1g2622 1412 Pfam CLASP N terminal 772 966 IPR024395 -
Prci1g2622 1412 Gene3D - 1193 1402 IPR011989 -
Prci1g2622 1412 Gene3D - 1 221 IPR011989 -
Prci1g2622 1412 MobiDBLite consensus disorder prediction 219 265 - -
Prci1g2622 1412 MobiDBLite consensus disorder prediction 519 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2622 Prci-Chr1 45724377 45740057 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2622 K16578 - gmx:100796697 2315.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2622 1 45724377 45740057 Prci3g3137 3 42611421 42624622 CCT
Prci1g2622 1 45724377 45740057 Prci1g2622 1 45724377 45740057 ECH