Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3111 ATGGAGTCTCTGGCCAGACTGCATCACTGTCACCAACCGCTTCCCCTCTCACTCAATCACCTTCCTTCTTCTTCACTGTCAGTACCCATATTTTCCGTCTCCTTCAGGTCTCTACCACCCCGTGTTTCGCCTTCGCAATTATCTTCTTCGTCTTTCAGGTCATCTTCCATCATAGCGGCATCCTCGCCGTCAGAATCATTCTCTGATTCTGCTTTCGGTAGATCCAGAACCACAATACCGCAGTCCTTCCAAACCCTAAACTCCCTTTTCTCACCCGTCGTCCGAACCACCTGTACCATCATAGCAGCGGCTGCGTTTTTCTACATGCGTCTTCACCACAAGCCCGCTATGGCAGCCCCGCTTGAGATGCCTAAGGTGGAGTCGAGTGAGGAGTCGATGGAAAATTCTTCGAGTGAAGAAAATCATAGAGCTATTGAAGAGAAATTGAGAAACAATCCCAATGATACTGAGGCTCTTCGGTCGCTCATTGAGATAAAGGTCAGAGCGCGCAAAGTTGATGAAGCAATCCAGGCTATAGACCGTTTAATTGAGCTCGAACCGGAAGAGTTCGAGTGGCCATTGCTGAAGGCTCACATGTATGTTTACAATGGTGACTACGAATTAGCCAAAGAGAAGTTCGAAGAAATTCTAACGAAAGATCCCTATCGTGTCGAGGCCTATCATGGCCTAGTAATGGCAACTTCGGAGTCGGATAAGCCATTGGAGGATTTGTTAAAGAGGGTTCAACAAGCAGTGGAATTGTTCAAGAAACAAAAGCGGGAATCGGAGGTCAGGGATTTGAGGCTCCTGATTGCGCAGATTAAAGTAATGGAGGGAGAATTTTCTGATGCGCTGAAGGCCTATCAGGAGCTTGTAATGGAAGAGCCGAAGGATTTCAGGCCTTACTTATGTCAGGGTATTATATATACTCTTCTAAGAAAAAAAGATGAAGCCGAAAAACAATTTGACAAGTTCCGGAGGCTTGTCCCTAAGAACCATCCTTACAGGGAGTATTTTGAGGATAATATGTTTGAAATGAATGTAATTTCACAGAAGACACAGAGGGAGGGAGCGGGTGCGAAGAACTGA 1089 0.4619 MESLARLHHCHQPLPLSLNHLPSSSLSVPIFSVSFRSLPPRVSPSQLSSSSFRSSSIIAASSPSESFSDSAFGRSRTTIPQSFQTLNSLFSPVVRTTCTIIAAAAFFYMRLHHKPAMAAPLEMPKVESSEESMENSSSEENHRAIEEKLRNNPNDTEALRSLIEIKVRARKVDEAIQAIDRLIELEPEEFEWPLLKAHMYVYNGDYELAKEKFEEILTKDPYRVEAYHGLVMATSESDKPLEDLLKRVQQAVELFKKQKRESEVRDLRLLIAQIKVMEGEFSDALKAYQELVMEEPKDFRPYLCQGIIYTLLRKKDEAEKQFDKFRRLVPKNHPYREYFEDNMFEMNVISQKTQREGAGAKN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3111 362 Gene3D Tetratricopeptide repeat domain 125 345 IPR011990 GO:0005515
Prci3g3111 362 ProSiteProfiles TPR repeat profile. 156 189 IPR019734 GO:0005515
Prci3g3111 362 PANTHER TRANSMEMBRANE PROTEIN 253 334 - -
Prci3g3111 362 SUPERFAMILY TPR-like 156 339 IPR011990 GO:0005515
Prci3g3111 362 Coils Coil 241 265 - -
Prci3g3111 362 SMART tpr_5 299 332 IPR019734 GO:0005515
Prci3g3111 362 SMART tpr_5 190 223 IPR019734 GO:0005515
Prci3g3111 362 SMART tpr_5 265 298 IPR019734 GO:0005515
Prci3g3111 362 SMART tpr_5 156 189 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3111 Prci-Chr3 42351287 42352851 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3111 - - qsa:O6P43_006759 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2668 1 46077456 46079531 Prci3g3111 3 42351287 42352851 CCT
Prci3g3111 3 42351287 42352851 Prci3g3111 3 42351287 42352851 ECH