Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2668 ATGGACTCTCTGTCTAAATTTCACCACTGTGGTCAACCATTGCACGTATCTACTAGTCACCACCGTTCGTCGTTTCCAACGCCCTTTTCTTCCGTCTCTTTCAGGGCGCTACCACCGCCGGCTTCCCCTCTCCAATTTCCCTCTTCTTCCTTCCGGTTATCACCTCTCAGAGCGTCTTCCTCATCCTCCACCTCATCCACTGATCCCTCATTTCCTAAGCCCGGACCCATTCTGACCCCTCTGCTCCAAACCCTAAACTCCCTTTTGTCACCTGCTTTTGAAACTGTTTGCATCATTGTAGCCGCATCTGCATTTTTTTTCATGCGTTTTCAGCATATGCCTGTTATTGCAGCTACGGTTTCGTCATCCACGGTGGAGTCCTTCCAAGAGTCGACGGATAAATCTTCGTTCGAAGAAAAGGAGAGAATTATTGAAGTGCAATTGATGGATAACCCCAATAATATCGAAGCTCTTCGGTCTCTCATGGAGCTTAAGATCAGAGCGCATAAAATTGAAGAGGCTATTCAGGTCATTGACCGTTTGATTGAGCTTGAGCCCCATGACTTTGAGTGGCCGCTTATGAAGGCTCATATGTACATCTATAATGGCGACTACCAATTGGCCAAAGGTGGGTTCGAAGACATTCTGAGTAAAGATCCATATCGTTTTGAAGCTTATCACGGCCTTGCAATGGCTACTTCCGAATTAAACGAGCCATTGAACGATTTGGTGAAGAGGGTTAAAAAAGCTGTGGAGTTTTGCAAAAAGGAAAAGAGGAACTCAGATGTCAGAGACTTGAAGCTATTACTTGCGCAGATTAAAGTCATGGAGGGATCCTTTTCTGACGCGCTGAAGGCCTATCAGGAGCTTGTCAAGGAAGAACCAAGAGATTTTAGACCGTACTTATGTCAAGGTATCATATATACCCTGCTTAGAAAGAAAGATGAAGCGGAGAAACAATTTGAGAAGTTCCGGAGGCTCGTCCCAAAGAATCACCCTTATAATGAGTATTTTGAGGATAATATGTTCGCAACCAAGTTTTTCGCGCAGAAGTTTGAGAGGGAGGGAGCTGGAACAAAGAGCTGA 1086 0.4521 MDSLSKFHHCGQPLHVSTSHHRSSFPTPFSSVSFRALPPPASPLQFPSSSFRLSPLRASSSSSTSSTDPSFPKPGPILTPLLQTLNSLLSPAFETVCIIVAASAFFFMRFQHMPVIAATVSSSTVESFQESTDKSSFEEKERIIEVQLMDNPNNIEALRSLMELKIRAHKIEEAIQVIDRLIELEPHDFEWPLMKAHMYIYNGDYQLAKGGFEDILSKDPYRFEAYHGLAMATSELNEPLNDLVKRVKKAVEFCKKEKRNSDVRDLKLLLAQIKVMEGSFSDALKAYQELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPKNHPYNEYFEDNMFATKFFAQKFEREGAGTKS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2668 361 SMART tpr_5 298 331 IPR019734 GO:0005515
Prci1g2668 361 SMART tpr_5 264 297 IPR019734 GO:0005515
Prci1g2668 361 SMART tpr_5 155 188 IPR019734 GO:0005515
Prci1g2668 361 ProSiteProfiles TPR repeat profile. 155 188 IPR019734 GO:0005515
Prci1g2668 361 SUPERFAMILY TPR-like 157 337 IPR011990 GO:0005515
Prci1g2668 361 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 42 336 - -
Prci1g2668 361 Gene3D Tetratricopeptide repeat domain 110 347 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2668 Prci-Chr1 46077456 46079531 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2668 - - qsa:O6P43_006759 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2668 1 46077456 46079531 Prci3g3111 3 42351287 42352851 CCT