Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2988 ATGGGAAGTGGGTCGACATTGGCGGGGAAGGAAGTTCCCATCATCAGTAACGATGCCGTCAAGTGGATTGAATTGTCCGTTCCTTCTTCTCCCAACAGTGCCGCCACTGCTGATGACAGTGGGACTGCCACTCCTGGACCTCCCAATGAGGACCGCGCCTCTTGCTTTGTCATTGGAAGTCCTTCTACTTATCTGATATGGAGAATTCACAAAACGCAGCCTCAAGCATTAGAGTTGCTGGAGATCCGTGCTTCCCAAGAATTTCCTAAAACTGGATTGAGGTTCACTTTCGCTGACGCGCTCTGTCCATTTGCTTTCATCTGCAAAAATGAGATTACTGCCAGTTCTAGATTCCCCTTCTTGCTTTATGTATTAACTGTATCTGGGGTGGCTTACCTCTTGAAAATTAGAGATATTTCTGCATATGCTTCCTGCTCCGTCTTCCCAACTCACGAGCTTACAGAGCTTAATGTGCGCGATTATTCTAATCAAATGCCAGTGACTGCGGTGACTGCGACTTCCGGGTGTCTTGCTGTTGGCAGAAATGATGGTTCTGTTTGCTGTTTTCAGCTCGGTGTACTTGATCCAAATGCTGCTGGATTTGTGGTTGAGCTTAGAGATGAAGCTGGAATCAGTCGATTGTGGGGCCTTATGTCAAGGGGTAAAATGGTGAGTTTGGTACAAGACATGGTGATGTACGAGCTTCATGGTAAAAGATTCCTATTTGTACTTCATTTGGATGGATTACTACGCGTTTGGGATCTCGCATGTAATTCCAGGGGAAGAAGAATTTCTTATGCATTACAAGAAGAGTTTGTGGCTGATCAACTATTTCAGGGTTCAGATCATCTTGCAGATGAAATTTTGCAGATTTCACATCTATTATTTTCATCTTCCAAGGATGATATGGTGCCTTTTGTATCTTCAATTTTCTTACGCAGGCTGCTTCTTCCTGGTGTGCATCATAATTCTGTTTTGCATGCAACTCTTATCAAGTATAAAAAGCACTTGGTGGAATCTGAGTTCCAAGCGTTAACTACAAATGGACTAAAAAAGGAGATACTTTCAGCTATTGAACATGAGGTTGGAACTGAAAAGATGCCCATATTTCAATGCTGGAAGTATTTCTGTGCCCACTACTTCCATAATTGGTGCAAGATCAATGCATCATGTGGCTTGCTCATTGACTCCTCTACTAATGCGGTTGGTTTAATTAGAAAAAGTTCAATATCACTTTTTCGGTCTCTGGAAGATATTGAGCGGATTATAGAAGGAGAAGGTGGTGATCTCACAGGTCTTGTGGATTTACTTGATGATGATCTTGAGCATGAAATTCCAACAGAATTGATCAGATGTGTTTTGAGTTTTAGCCAACAGTTGGGCAAAATGGCTTCTTCTATATTTTATGAGTCACTTCTAAGTAGCCCAGCTATCTCTTCTGAAGATATTATTAATTGTATAGTGAAGATTCTGGAAACTGGATATGGTTCATTGGGTCCAGTTGTCCATGCATCTGTTCCTGGGAATGAAATAATTCTGTCAAAGGAGCTTGCAGATCATAGAAATCTGAGGAGGCTTTCTATTGATATGTTCTTATCTCTTCAAGGGTTGTACAAGAAGGCTGCATCATGGGGCAGGATATTAGATGTAATTGAGGGTTTTCTGAAATTTTTGGTTCCACATAAAACTGTGCACAACTTTGATTTTGAAAAATCGTCAAATGTCAATTCATCCGTTGTAGTCCATGCTACTTATCAGGTTGCAAAGGTGATGTATGAGTCTGCCTGGGACTTTCTTTTATTCCTAAGCTATCTATTGGACATCAGTGGGCAGATCCATATGTCACATGGTGATATAACCAGAATACAAACTGAGTTAGTTCCTATGCTTCAAGAAACTATTTTTGAGTGGCTAGTTGTCATCTTCTTTGCTATCACACCATCTGCACCAACTGTAATTGAGGATTTTAATTATAAACTCTCTTCATTACAAATCGACAACATGGGAAAACGGTCATGGAATGAGAAGCTTGGAAGATGTGACTTCACACTGGCTTTTATCTTCTTGCTGAATGCTAGAAGTTCATCCGTGGATGGTAATCAGCTTTCTTCAGAATCTTTTTCAAATATGCTTGGCATTGTTGTCAAGATTAGAGACTTTGTCAGTTGGATAATCTATGGCCAGTCTGGAGGATTTTCTACCTTCTTGAGCCGTTCAATTGATCTCTCCTTTATCCTTTTCAAGCATGGGCAGTATGGTGCTGCTGAGCAATTGCTTACAATGGCGGAGGCTCATTTACACAAAGAGAAGACGTCCCAAAGTATTCAAGAAGCTGATGGTGGATGGTGCATACGACAGCATCTTCTAGGTTGCGCCCTTCTTGCACAGGTGCAGTGTGGATTGCGTGGCACTCTGAAAGAGAAAAAGGTCTCTGACGCTGTTTGTTGTTTCTTCAGGTCTTCATCTGGGAATGGTGCATCTGAGGCTTTGCAGAGTTTGCCACATGACATAGGATTGCCATATCTTAATTTTGGTGGCTTTGCATCAATTGCTGCATGGAAGCTTCAGTACTATCAATGGGCAATGCAATTATTTGAACAGTATAATATTAATGAAGGTGCTTGCCAGTTTGCTCTTGCTGCACTTGAGCAAGTTGATGAAGCTCTATGTGTGAAAGATGAGAAGCACATGAGTGACTCAACTGAGGAATCAGCAACAATGATCAAGGGACGTCTATGGTCGAATGTCTTCAAATTTGCCTTAGATCTTGGCCACTATTCTGATGCATACTGTGCAATAATTTCAAATCCCGATGAGGAGAGCAAATATATCTGCTTGAGACGTTTCATCATTGTCCTTTATGAACAAGGTGCTATCAAGATTCTTTGTAGTAATAAGCTTCCCCTCACTGGTTTAATGGAGAAGGTAGAGCAGGAGCTTGTTTGGAAGGCTGAAAGATCAGATATATCAGCAAAGCCAAACTTGTACAAGTTGCTTTATACATTCCAAATGCATCAACATAACTGGCGCCGAGCAGCGAATTACATGTACCTCTATTCAGCTCGTTTGAAGACTGAAGTGGCTCTAAAAGATTATCATGGCTCTTCATTGATATTGCAAGAGAGGCTGAATGCAATCTCTGCTGCTATTAATGCCTTGCATCTTGTTCATCCAGCACATGCCTGGATTGATCCACCAGCTGATGGAAGTTCTCTTATGAGTGAACAGTATCCAAGTAAAAAGGCTCGAAGAACTGTAGACGTAGATTTATCTGCTGAAAATGATACTGAGTGTCAAAGCTGGCAATCTTCTGTTGATCTTGAAAAACTTGATCATGAGTTTGTGCTAACGTCAGCAGAATACATGCTGTCGCTGGTAAATGTTAAGTGGATATATACTGGTAAAGAAGGAGCCCTGTCAGATTTGGCTGATCTCCTTGTCCAAAACTATTTATATGATATGGCCTTCACAATTCTTCTCAGATTTTTCAAGGGCTCAGGACTGAAGAGGGAGCTTGAAAGAGTTTTCTCTTCTGTATCTTTGAGATGCTGTCTTGATAAAGTAGAATCCACTTGGATTGAGCCACGCAGTAATTTGTTGACATCGTCCAAGCTTGAAATGGTTGTCCATGGTTCACCTCTTACAGTTTCTACAGCCTCACAACCTGACAGGAATAGCCATTGGGCAACTCTGGAGCTTTACCTTGTAAAATATTGTGAATTTCATGAGAGGCTACCCGTTATTGTTGCTGAAACTCTTCTTCAGGCAGATTCTCAGATTGATTTGCCTCGTTGGCTGGTTCAATTGTTCAAGGAGGGTCAAAGAGAAAAGATCTGGGGAATGGCTGGTCGAGAATCAAATCCTGCATCTTTATTTCAACTTTATGTTAACTATGGTCGATATACAGAAGCCACTAATCTCTTGCTGGAGTTCTTAGAATCATTTGCATCAATGAGACCAGCAGATATAATCAGACGGAAAAAGCCATTCGCGGTTTGGTTCCCATACACCACAATTGAGCGACTACTGTATCAACTTGAGGAGTTGATCAAAATGGGTCACATGGTAGATCAATGCGACAAGCTGAAGAAGATGTTATATAGTTCTTTGCACAATCATCTTAAATTGTTAAAAGAAGACTCGGATGATGCTATTTCTGTGGCTTGTTGA 4170 0.412 MGSGSTLAGKEVPIISNDAVKWIELSVPSSPNSAATADDSGTATPGPPNEDRASCFVIGSPSTYLIWRIHKTQPQALELLEIRASQEFPKTGLRFTFADALCPFAFICKNEITASSRFPFLLYVLTVSGVAYLLKIRDISAYASCSVFPTHELTELNVRDYSNQMPVTAVTATSGCLAVGRNDGSVCCFQLGVLDPNAAGFVVELRDEAGISRLWGLMSRGKMVSLVQDMVMYELHGKRFLFVLHLDGLLRVWDLACNSRGRRISYALQEEFVADQLFQGSDHLADEILQISHLLFSSSKDDMVPFVSSIFLRRLLLPGVHHNSVLHATLIKYKKHLVESEFQALTTNGLKKEILSAIEHEVGTEKMPIFQCWKYFCAHYFHNWCKINASCGLLIDSSTNAVGLIRKSSISLFRSLEDIERIIEGEGGDLTGLVDLLDDDLEHEIPTELIRCVLSFSQQLGKMASSIFYESLLSSPAISSEDIINCIVKILETGYGSLGPVVHASVPGNEIILSKELADHRNLRRLSIDMFLSLQGLYKKAASWGRILDVIEGFLKFLVPHKTVHNFDFEKSSNVNSSVVVHATYQVAKVMYESAWDFLLFLSYLLDISGQIHMSHGDITRIQTELVPMLQETIFEWLVVIFFAITPSAPTVIEDFNYKLSSLQIDNMGKRSWNEKLGRCDFTLAFIFLLNARSSSVDGNQLSSESFSNMLGIVVKIRDFVSWIIYGQSGGFSTFLSRSIDLSFILFKHGQYGAAEQLLTMAEAHLHKEKTSQSIQEADGGWCIRQHLLGCALLAQVQCGLRGTLKEKKVSDAVCCFFRSSSGNGASEALQSLPHDIGLPYLNFGGFASIAAWKLQYYQWAMQLFEQYNINEGACQFALAALEQVDEALCVKDEKHMSDSTEESATMIKGRLWSNVFKFALDLGHYSDAYCAIISNPDEESKYICLRRFIIVLYEQGAIKILCSNKLPLTGLMEKVEQELVWKAERSDISAKPNLYKLLYTFQMHQHNWRRAANYMYLYSARLKTEVALKDYHGSSLILQERLNAISAAINALHLVHPAHAWIDPPADGSSLMSEQYPSKKARRTVDVDLSAENDTECQSWQSSVDLEKLDHEFVLTSAEYMLSLVNVKWIYTGKEGALSDLADLLVQNYLYDMAFTILLRFFKGSGLKRELERVFSSVSLRCCLDKVESTWIEPRSNLLTSSKLEMVVHGSPLTVSTASQPDRNSHWATLELYLVKYCEFHERLPVIVAETLLQADSQIDLPRWLVQLFKEGQREKIWGMAGRESNPASLFQLYVNYGRYTEATNLLLEFLESFASMRPADIIRRKKPFAVWFPYTTIERLLYQLEELIKMGHMVDQCDKLKKMLYSSLHNHLKLLKEDSDDAISVAC 1389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2988 1389 Pfam Nucleoporin Nup120/160 65 267 - -
Prci3g2988 1389 Pfam Nucleoporin Nup120/160 292 422 - -
Prci3g2988 1389 MobiDBLite consensus disorder prediction 29 43 - -
Prci3g2988 1389 MobiDBLite consensus disorder prediction 29 51 - -
Prci3g2988 1389 Pfam Family of unknown function (DUF5311) 434 626 IPR035192 -
Prci3g2988 1389 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP160 1 260 IPR021717 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2988 K14303 - gmx:100807578 1707.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g2988 3 41509772 41524491 Prci1g2809 1 46908425 46913344 CCT